trnaa-ugc_88


Basic Information

Item Value
gene id trnaa-ugc_88
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13453440 ~ 13453511 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1209
ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1209 True 72 tRNA 0.54 1 13453440 13453511

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc_87 NA coding downstream 76 13453293 ~ 13453364 (-)
trnaa-ugc_86 NA coding downstream 257 13453112 ~ 13453183 (-)
trnaa-cgc_29 NA coding downstream 439 13452930 ~ 13453001 (-)
trnaa-cgc_28 NA coding downstream 621 13452748 ~ 13452819 (-)
trnaa-cgc_27 NA coding downstream 926 13452443 ~ 13452514 (-)
trnaa-ugc_89 NA coding upstream 277 13453788 ~ 13453859 (-)
trnaa-cgc_30 NA coding upstream 749 13454260 ~ 13454331 (-)
trnaa-cgc_31 NA coding upstream 931 13454442 ~ 13454513 (-)
trnaa-ugc_90 NA coding upstream 1113 13454624 ~ 13454695 (-)
trnaa-ugc_91 NA coding upstream 1294 13454805 ~ 13454876 (-)
G44942 NA non-coding downstream 95919 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 98657 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 99260 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 99790 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 100371 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 83433 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 239827 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 243988 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 370161 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 383794 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 555722 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2383974 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2468308 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2617915 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 201749 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 264691 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 706964 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1874072 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2035607 15489118 ~ 15490685 (-)

Expression


Co-expression Network