G26803



Basic Information


Item Value
gene id G26803
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3346000 ~ 3351924 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU30255
AAAAATAAATACCGTTTTGGCGCTGTTTAATGTGACGTGACAGATCGCTCAGTTAAAGAGAAGCGGCAGCACGGAGCGCATGTGAACATCCTCTCCTCCGCTTTAATACCAGTTACAGCGCGAAATAAACATGACTCAACATCTGAAGGTATGTTAAAATATACAGTACAACTTACCGAAATCCGTATCATGTCGTGTGTAATAGCTCAATCAGTGTTTCAACCTCGAAAGATGTCAATAAAACAGCTTGTAAACAATGTCACGTAACGTCACATTTACCTCAGAAAAACATATTCAGTGACCATAAACTCATTAGTCAGCTAGAAAAGTGAACTCTAGAAAGCAGCATTCTGATAAATATAGCTATGCACCGTTATATATTCATTATAATGTTCTTCAATATTTAATGCATGTTTGAATAAATCAGTTATGACAGCCACGATTTAAATAATAAAAAAAAAAAAAAAAAAAACACGAGTGTAATTTAAGTGTTTGTATATAAATAAGTTAATTTTAATCTTCATTATTATAGTAAAGTAGTACCAACTGACTCCCATGTGTAGTTTACAGCAGTAGTTGAGAGATTTTTTTCCTCTAGAGAATTTGCCATGTACTGTAACTGATATACTACATCCAAAATAATCGATATAGAATCGAAATCGTAATCGAATCAAAAGCATGTGAATAGAAATTGAATCGAATCGTGAAAATTGTGTCAATACCCAGCCCTATTATCTATGTAAAATGTTATAAGTTTAAATATTATTTCATGTTGTAACTGTAGGGCTAATACATTATGTCCCCTATGAACTGCATATGTGAATATTATGTAGACCTATTGTCTACATCAAATTCATGCTTTAGGGTGTGTTCACACTTGTCATGTTTGGTTCAATTAAAGCGAACCCTGGTGCGATTGCTCGGTTAGTGTGGTTCATTTGAACATGTGTGAACACTGCCATCCGAACCCTGGTGCGCACCAAACAAGCAGCTCTGGTGTGGTTCGAATGATATATGAATGCAACATGGACCAAAGACATGTAAACGAACCAAAAACAGGAAGATGAGACCCTAAAAAGGACATAATCCTCACGCATATCTGTTTTTCTCGTCGTAGTCGCGACTTTACTCATCACAGGCATCAGATCAGACACGCGTCTCCACGCGTTTGTGTGTGTGTGACGGATGGATTCCCGTCGCTGTTTTGACTCCTTTACACATTTTATAAGCTCTTCACGAGTTCCCAGCTGGCCAAAATACCATCATATGCAGGCTACGCACACACAACAAGAGCATTTACCTCAGCACACAGCATTGTTTTGGATGTTCGGTATGTTCCGTCTCAAAATAGGCAATACGTAATAACATTCGACCAATCAGGTTGTGAACGTGTTACTATGCCTTTAGGTTCGGTGATAAAATTGCCAATTTGAACGCTAATCGGACCAGGACTAAATGTTTTTTTTTTCTTTTTTGGTCCGGACCAAACTAACCAAACAAATCGAACTACAAGTGTGAATGCACCCTAATTGTAGACTAATCATCGCAGATTTCATCAGTACAGTCTGTGGCTTGCAACCATAAATGTCTGTGTTTAGCTTCAAAGGGCGTCTTCGAAGACGGTATTCTATAAAAATGAAGACTATCTTTTTCCGATTCTTACATCCAAATGCACAACAGATTTTGCACGTTTTCCTCCACTTGTTACCATTGTTCTTCTGCCACCTCAATGCACGCGCAGCTGCAAGTGACTTAACTGTGACGTCTGCTCCCAAATGGTCTAATCGTACAATATTAGTTTAATGTCTGTAAATTTATTGTGAATTAATTGTCACTGCAGACAAGAACAAATGTTTATGGTTAATTTGCGTCGGATAAGCGAAACATAGCAGTCATTAATATGGGTGTGCCTATTGCACAATGGCAACACACACATGGTAACTGACGTAACACAAAAGTTTTGTATGTTGGAAATATTAAATATGAACATATATTTGGGATTATTAGCAGAAATTGTATACAATGCAACATCTTGCTCGGAGAGACATTATAAATGCTTGGAAATTATATTTAAGTATTTAAAGGGATAGTTCACCCAACAATGGAAATTTTGTCAATTTACTCACCCTCAAGTTGTTCCAAACCTGTATAAATTTCTTTCTTCTGCTGAACACTAAAGAAGATATTTTGAAGAATATGGGTAACCAAATAGTTGATGGACCCCATTGACTTAGATGGTATGGGGAAAAAATACTATGGAAGTGAAACCAAACCTGCTTGACGTGTGAATACAAACCTCTTCCAGAAGCTCAAATGTGCTGCATAATACACAAGAATGAACCTCATTAGTTTTCGCACGCGTCACGCAACCATGCTTGAGCTTCTGTTGGTTTACCACAACTGCTGTGTTATGTGAATAGAAGCCTAAATTCTGTTCATCATATAAAGCAATCATTTCTCTTCAGAAAATTTTGGATTAAACAATACATATGGATTAGTTTTATAATCACTTTATTAACTTTTAAAAAGGGTCAAATTTTCAGTTGCATAGCTGTCTAATGAGGGACAGAAATCTCTCAGATTTCATTAAAAAGATCTTCATTTGTGTTCCGAAGATGAACGAAAGTCTTAAGGGTGTGGAATGACATGAGGGTGAGAAATGACAAAATTTTCATTTTTGGGTGAACTATCCCTTTAAAATAATAATTAATAAAAAATTTGAAAAAAGTTGTATTTACTGCATTTATCAAAAATACAAAGAAACCAGTAATATTGTGAAATATTGGAAAAACAACATTGGACCCTATTTATTTACATTCTATGGATGATTTTTTTTTTTTTTTTTTTAAACCATCTTTTGTGTTCCACAGAATAAAGAAATGATAGCAGAACTTTCATTTTTGGGTGAATTCTACCTTTAAGTATGAGTTAATACAAATTATATGCCCTTATATGCCGTTATATTACTTGCCTGTATTGTGGGGGCTGGTGTCACAGAGGGATTGCTGCTCTTGAAGGGCCAGAGTCTGGTTAACAAACCTCAGCATACCTGACAGAGACTCTAGGTCCGGTTCCTCAGGTTCCTCTGGGTCCAGCATGTACGTGAGTGGATTAAAGGACATGTCTGTAGTAAAAGTGGCCTCATGGGTGCTTAGACCCTGCCAGTCTGGGGAGAGGGGCGGCAGCAGTGCAGCCTGAACACTAGCTTTCAAACTGTCCGAAAGCTCTAGAGAGGCGTCAGAGAAGGTGTTGTGCCAAGAGGAGAGGCTGGAACGTGCTGAAGAGTTTTTATGGGAGGGGGACGGGGAGCCGTGAAGAATAGAGTCTTTGAGAGGAGGAGAGAGAGATGGAGGAGTGCTGGGTTTGTGACGAAGTGTGATATTGTGTAGTTCTGTGGCCCTTTCGAAGCTGGAGAGCTTGGCCTGAAGACGGGTGATCTCGGACTCCTAAGAAAACACAGTACAAGAAATGACAAGAACTCTGTTCCAAAACCAGATTGGATGCCTATCTGTTTTTTTTCTTCTTCTTTTTCATTATTAATGGTTTTTGAAAATGTTTTACATTACTAGAGTGGTGGAACTATGGCGCATTTTTGTAGGCCAAATTCTGGTAGCGAGTTTGCATTTTAGCACTTCCGATTCCATTGTCCCAAAGTCAATGGGTTTTTTGAATGGGTTTTTGATTAAATGGCTGAAATAAGGCCGTGGTGTAGTTCACTTATAGCCTACCTTTAGCTTTTTGTTTCTGGCGACTGCATTTTGGCTTCAAAATTCATGTTGTGTTCATCTGTGAAAATTATCTTAATGGACAAAACGTGTAAGCATCATAAACTTCTGCTGATCACAGAACTTATTTTTTGCGATAATCGAAAAGCCTATAGGAAAATCCTATTGGGTTTTTGTCAAGTGAACCAGCGTGATGCTAACTGCCGATTGGCCTGCAAAGTGACGTCATAGTTCTACCACTTTACATAAAGTTTAAAAAAAAGGGGGTGGGGGGGAATAAACAGTAGAACAAGGGCTATACATTCTTTGTTTTGTTTGTTTTATTACTGTTTATTGTCGCTTAAATGATTTCACCAACAAACAATTCTGTTGTTGATAGTTGATATAAAAACTGCCTTATGTATAATTTAAATGTTTGTACAATTCAGTTTTAGCTATTTGAGTGCTGATTATTAAATACGTTTGATTAATTAATTAATTATTAATTCATTATTTACGTTTCAGTTTTTGGCATCCGTAAATTTAATTTTTGGCCTACTTTCATTTTCAAACTTTTATTTCACTGCATTCCTAAAAATTGCAATTCGACGGTGCAGCCCTAGTGCTGCTTGTACATACACTTTCCTCATACTCTAACTACTGAAATTAACTGTATTTTCAGGTAAAATGATTGATTTGAGACTGGCCATCGATCCAGTTTGTTTCCCTGCCATCGGCCTGTGATGCTGGGATAGGCTTCAGCATCCTACACGGCTCAGAGAATGGATGGATATTTCATTTGGATGCAATATGATATTGCTGTAGGTATAGATTTTGTTAACACCATACAATGAGTCATGTACCTTGATAAGCAGGTTCTCATTAGCACTCTGCAGGAGCTGTTCTTTGCTGTGAAGCTCGGCGTGTAGGCGGGCAGAGGTAGATCTGGCCTCCTCCAGCTGGTCTCGGGCCTGTTGCAGCCGCTGGCTCAGCTGCTCCTGAGAGTTTCGCAAACTGCTGGAGATCTGATCCGAAACCTTCAGCAGCTGCCCACGAGTCTGCTGTAGATCTGAAAGCTGTGAGGCAAAGAGAGAGGGTCAGGCACAGCAAACCAGCTCAACTGTCCTATGAGAATGAAGACAAACTTTCTGTTTCTCTGAACCTCTTTGTGATGCTCTTCTCTCTGCTGCTCAAGCTCCTGCTGCAGGGCAGTAATAGTGGCCTGGAGTCTGACCTCAGCCTGTGTAGAGCGCTTCTCCATCACAGATATCTCCTCTCGCAGCTGATGAACTTCACTCTCCTACAAAAAAACAAAACAACAACAAGCAGGTTAGAAACCACCAGGCCCTGAGAGAACTCAAGAATCTTAGAGATATCTCATGAAAAGGGAACTTTCACTTTTCTGATCTGCTGATCTAAACTGTACTTTTTCAGACTGATGTGTCACCAAGCCACAGATTGTGATGTTACACCATACTCAGCTATGTTCCCATAAAGTTTAAAGTCATGTAGGTGTGAGATAACGTAATTTTCCGAGGAGGCATATGTGCAAAAAAAAGCTAGATGCAAATAATCACAGCACAAAAAATTATTCCACTGCAAATATTCTATTTGTCATGCGAGTTGTGAGATTAAATAAAGCATTAAAAACTCCAGAGGATTTTAGTATGTCAGTGGGAAACTTGAACAGACTTGTATTCTCTTATGTTTGCAGTTTCTCCTTTGGCTGCACAAGATGAGAACACATTTTGTATAATTTCTTGAGTCAAGAAAGAGTTGGAATTTACAATATATTTCCTCAGCAAAACACTCACTCTGGTTGGATGTGCTTTAATCTGCAGGAAACTATTTAACAAGCATAATCGAATAAAAAATGTGCATGTAAACGCAACAGCAAATGACAAAATGATTGTCAAAGATAAAAAAAAAAAGCACATAAGGTAATAAAGTGCCTCCATGTCGCTGCATGATCGCGCTGTCATTCCATCAATGTGGCAGTTGTGGCCTAATGGTTAGAGAGTCGGACTTCAGTAACCCGTGTTTCACGTGTTTGAGTCTCAGTACTGGCAGGAAACATAGGTTGGGGGGAATGAATGAACACTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU30255 True 5808 lncRNA 0.39 2 3346000 3351924

Neighbor


gene id symbol gene type direction distance location
CI01000004_03277921_03285364 FAM69AA, FAM69A coding downstream 60636 3277741 ~ 3285364 (-)
CI01000004_03244252_03265862 EVI5 coding downstream 79953 3243903 ~ 3266047 (-)
CI01000004_03238528_03240932 GFI1AA, GFI1 coding downstream 104509 3238358 ~ 3241491 (-)
CI01000004_03214098_03222707 GLMNA, GLMN coding downstream 123293 3214098 ~ 3222707 (-)
CI01000004_03204599_03205569 TCEANC2 coding downstream 139932 3204572 ~ 3206068 (-)
CI01000004_03433963_03436906 GADD45A, GADD45AA coding upstream 81908 3433832 ~ 3436906 (-)
CI01000004_03475454_03478135 NA coding upstream 122970 3474894 ~ 3479485 (-)
CI01000004_03505898_03508656 NSUN4 coding upstream 153874 3505798 ~ 3508770 (-)
CI01000004_03514180_03525227 PIF1 coding upstream 161749 3513673 ~ 3525582 (-)
CI01000004_03556991_03559357 ARTN coding upstream 204558 3556482 ~ 3559357 (-)
G26812 NA non-coding downstream 13757 3330745 ~ 3332243 (-)
G26810 NA non-coding downstream 39575 3300799 ~ 3306425 (-)
G26788 NA non-coding downstream 70279 3267683 ~ 3275721 (-)
G26820 NA non-coding downstream 130798 3214890 ~ 3215202 (-)
G26754 NA non-coding downstream 166642 3172410 ~ 3179358 (-)
G26837 NA non-coding upstream 3291 3355215 ~ 3355472 (-)
G26854 NA non-coding upstream 54479 3406403 ~ 3406827 (-)
G26924 NA non-coding upstream 196550 3548474 ~ 3548695 (-)
G26948 NA non-coding upstream 305630 3657554 ~ 3657869 (-)
G26955 NA non-coding upstream 321015 3672939 ~ 3673155 (-)
CI01000004_01773383_01774888 INSL5B other downstream 1571059 1772928 ~ 1774942 (-)
G27746 NA other upstream 1826303 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 2268459 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 3182903 6538904 ~ 6541252 (-)
G29388 NA other upstream 3279369 6631293 ~ 6631907 (-)
G29656 NA other upstream 4612440 7964364 ~ 7965500 (-)

Expression



Co-expression Network