trnaa-cgc_38


Basic Information

Item Value
gene id trnaa-cgc_38
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13458363 ~ 13458434 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1229
ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1229 True 72 tRNA 0.56 1 13458363 13458434

Neighbor

gene id symbol gene type direction distance location
trnaa-cgc_37 NA coding downstream 233 13458059 ~ 13458130 (-)
trnaa-ugc_99 NA coding downstream 572 13457720 ~ 13457791 (-)
trnaa-ugc_98 NA coding downstream 718 13457574 ~ 13457645 (-)
trnaa-ugc_97 NA coding downstream 899 13457393 ~ 13457464 (-)
trnaa-cgc_36 NA coding downstream 1081 13457211 ~ 13457282 (-)
trnaa-cgc_39 NA coding upstream 111 13458545 ~ 13458616 (-)
trnaa-ugc_100 NA coding upstream 287 13458721 ~ 13458792 (-)
trnaa-ugc_101 NA coding upstream 467 13458901 ~ 13458972 (-)
trnaa-cgc_40 NA coding upstream 953 13459387 ~ 13459458 (-)
trnaa-cgc_41 NA coding upstream 1257 13459691 ~ 13459762 (-)
G44942 NA non-coding downstream 100842 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 103580 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 104183 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 104713 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 105294 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 78510 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 234904 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 239065 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 365238 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 378871 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 560645 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2388897 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2473231 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2622838 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 196826 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 259768 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 702041 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1869149 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2030684 15489118 ~ 15490685 (-)

Expression


Co-expression Network