trnaa-ugc_105


Basic Information

Item Value
gene id trnaa-ugc_105
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13461487 ~ 13461558 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1240
ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcttgggttcaatccccagcatctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1240 True 72 tRNA 0.53 1 13461487 13461558

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc_104 NA coding downstream 213 13461203 ~ 13461274 (-)
trnaa-ugc_103 NA coding downstream 394 13461022 ~ 13461093 (-)
trnaa-cgc_43 NA coding downstream 576 13460840 ~ 13460911 (-)
trnaa-cgc_42 NA coding downstream 757 13460659 ~ 13460730 (-)
trnaa-ugc_102 NA coding downstream 1543 13459873 ~ 13459944 (-)
trnaa-cgc_44 NA coding upstream 417 13461975 ~ 13462045 (-)
trnaa-ugc_106 NA coding upstream 599 13462157 ~ 13462228 (-)
trnaa-cgc_45 NA coding upstream 1256 13462814 ~ 13462885 (-)
trnaa-ugc_107 NA coding upstream 1585 13463143 ~ 13463214 (-)
trnaa-cgc_46 NA coding upstream 1890 13463448 ~ 13463519 (-)
G44942 NA non-coding downstream 103966 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 106704 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 107307 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 107837 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 108418 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 75386 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 231780 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 235941 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 362114 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 375747 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 563769 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2392021 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2476355 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2625962 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 193702 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 256644 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 698917 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1866025 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2027560 15489118 ~ 15490685 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnaa-ugc-275 NA coding NW_023493666.1 JAAXML020000359.1 1039670 ~ 1039741 (-)