trnag-ucc_2



Basic Information


Item Value
gene id trnag-ucc_2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 14080933 ~ 14081004 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>unassigned_transcript_1264
GCGTTGGTGGTATAGTGGTTAGCATAGCTGCCTTCCAAGCAGttgacccgggttcgattcccggccaacgCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1264 True 72 tRNA 0.57 1 14080933 14081004

Neighbor


gene id symbol gene type direction distance location
lrrc40 lrrc40,LOC107709203,LOC107590628 coding upstream 95104 13981225 ~ 13985829 (+)
dlg1a dlg1,LOC107659037,LOC107738730,LOC108427717,LOC108271975 coding upstream 109030 13867877 ~ 13971903 (+)
ptmaa NA coding upstream 223033 13854242 ~ 13857900 (+)
phb2b phb2b,LOC107692360,LOC107591156,LOC108427714 coding upstream 257141 13820119 ~ 13823792 (+)
pde6d pde6d,LOC107590678,LOC107591155 coding upstream 261014 13813916 ~ 13819919 (+)
cldn34a cldn34,cldn34a,LOC107659013,LOC107709183,LOC107590626,LOC107692425,LOC107591192 coding downstream 36787 14117791 ~ 14121182 (+)
wwc3 LOC107590624,LOC107709196,LOC107659042,LOC107738905,LOC107692367 coding downstream 52337 14133341 ~ 14170086 (+)
ttc22 ttc22,LOC107692368,LOC107590622,LOC107659045,LOC107591163 coding downstream 111581 14192585 ~ 14197319 (+)
jak1 LOC107659055,LOC107709186,LOC107556544,LOC107739023,LOC107591175,LOC107692376 coding downstream 414463 14495467 ~ 14523316 (+)
LOC122347575 NA coding downstream 627504 14708508 ~ 14712351 (+)
G45075 lrrc7,LOC107659039,LOC107709201 non-coding upstream 83967 13992745 ~ 13996966 (+)
G45070 NA non-coding upstream 220324 13860255 ~ 13860609 (+)
G45056 NA non-coding upstream 244114 13836607 ~ 13836819 (+)
G44998 LOC102783117 non-coding upstream 418836 13661812 ~ 13662097 (+)
LOC122346715 NA non-coding upstream 423167 13656192 ~ 13657766 (+)
LOC122347615 NA non-coding downstream 48343 14129347 ~ 14131078 (+)
G45112 NA non-coding downstream 133207 14214211 ~ 14215282 (+)
G45095 pde4b,LOC107659050 non-coding downstream 182597 14263601 ~ 14286676 (+)
G45119 pde4b non-coding downstream 216627 14297631 ~ 14298231 (+)
G45121 NA non-coding downstream 238202 14319206 ~ 14320343 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other upstream 100647 13972173 ~ 13980286 (+)
G44887 NA other upstream 671021 13394229 ~ 13409912 (+)
G44645 NA other upstream 971567 13108735 ~ 13109366 (+)
smx5 lsm2,LSM2,smx5 other upstream 998814 13080565 ~ 13082119 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 1275233 12765821 ~ 12805700 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 1155161 15236165 ~ 15244280 (+)
G45419 sgip1,sgip1a,LOC107739126 other downstream 1277857 15358861 ~ 15459386 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other downstream 1483977 15564981 ~ 15566668 (+)
G45894 NA other downstream 3105704 17186708 ~ 17187308 (+)
G46022 NA other downstream 3914187 17995191 ~ 17996717 (+)

Expression



Co-expression Network