G48741


Basic Information

Item Value
gene id G48741
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 169999 ~ 170927 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU72164
ACAGGTACATCcacagttttgcagaaatgtatagAGTCACGTAATCCCAACAAGCCTAGGATGAAGTTAGACATATTTGAAGTAATGAGCACTAGAGATTTCTCCTTTTATATTGAATTAGAAAGCCCTTACAAATACAAGAGCCTTTTTATTGAGTAAGCTAGCACAAGTCTTTCCATGACATTTAGAAGTTTGAAAGGCCAGAAGTGAGTAACTATCAATTTCATGGTCTAATTGTGAttaaactgaatgaataaacCATGGGATTCTAATCAAAGCACAGTTTTGGCTTCATACGGCATTGcctttatcatttatttaacctTTGTGGTCTGGCCTGCGGATTTTTTTGTCAGCATGGCATCCAGTCGCAAATTCGAAAGTCTTTGTCTTATAGAACCTCTGGtaactttttttcagcattacaGCATTGTGGACCTGCAAAACGTTACGTAAATAGCCCTTCAGATAATATAGAAGCTCAAACTTAAATGATGTGGACAATGCAAGACTTAAGAAAAGCTATCAGAGTCTGAGACGAGCATCGCTGCTCGCAAAACAAATTATGGTTTATGAAGAAAATCAAGATGTAGTCTTATTGATGTGTACCCAGAAGCTATGAGATGCAGAGCATTTTGATTCAGCCCCTCTGAAAAACAATCTGCTCGGGGCGTTAACTGCAAACACCAACTCCTGTAATGGAGGATTGAATTACCTGCGGGTGCTGCTGTGATTTGCGGTAAGGAAACTATGGAAAGATTGACATCCTGATCTAAATGTGGAAGAATTTagtaaatattcaaaaagtCTAAAATTTCTTTAGCTATTTCCGCTTTGGTCTTAATAACTTTGTTTCCCCTAATAATGTATTGCTGCAGGGGACTGAATCTATAATTATCACAGATATAATTTCCTCAGCACCAGGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72164 True 929 lncRNA 0.38 1 169999 170927

Neighbor

gene id symbol gene type direction distance location
LOC122349836 NA coding downstream 146296 23604 ~ 23703 (-)
LOC122348751 sh2b3,LOC107594562,LOC107550292 coding downstream 154925 8263 ~ 15074 (-)
trnan-guu_33 NA coding upstream 109855 280782 ~ 280855 (-)
tifa tifab,LOC107742334,LOC107692005,LOC107659708,LOC107753989,LOC107588127 coding upstream 112406 283333 ~ 285000 (-)
tnfsf10l LOC107691962,LOC107562848,LOC107742295,LOC107701536,LOC107753950,LOC108410411,LOC103041464 coding upstream 168898 339825 ~ 358332 (-)
si:dkey-171c9.3 LOC107692004,LOC107742319 coding upstream 191096 362023 ~ 367395 (-)
gpr185b gpr185b,LOC107669001,LOC107562838,LOC107588216,LOC107742332,LOC107691958,LOC108267436 coding upstream 375176 546103 ~ 553394 (-)
G48736 NA non-coding downstream 48604 121019 ~ 121395 (-)
G48733 NA non-coding downstream 80579 87550 ~ 89420 (-)
G48720 NA non-coding downstream 105863 56405 ~ 64136 (-)
LOC122349555 LOC107704198,LOC107750288,LOC107658248,LOC107567655 non-coding downstream 165932 1991 ~ 4067 (-)
LOC122349723 rictora,LOC107658248,LOC107725140,LOC107704198 non-coding downstream 168135 1457 ~ 1864 (-)
G48743 NA non-coding upstream 1367 172294 ~ 173013 (-)
G48786 NA non-coding upstream 19461 190388 ~ 235517 (-)
G48781 NA non-coding upstream 23209 194136 ~ 238177 (-)
G48795 NA non-coding upstream 44424 215351 ~ 217471 (-)
G48802 NA non-coding upstream 68367 239294 ~ 241547 (-)
si:dkey-112a7.4 si:dkey-112a7.4 other upstream 40414 211341 ~ 213685 (-)
G48823 LOC107667730 other upstream 99442 270369 ~ 274498 (-)
LOC122348397 zgc:92429,LOC107588137,LOC107753943,LOC107668941,LOC103044742,LOC108434854,LOC108267498 other upstream 648710 819637 ~ 829670 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other upstream 709659 880586 ~ 888958 (-)
zgc:153151 NA other upstream 869995 1040922 ~ 1046317 (-)

Expression


Co-expression Network