G48808


Basic Information

Item Value
gene id G48808
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 256547 ~ 256785 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU72281
GTTGCTATATTTGGGTGGCTCTGGTTTTTGACGAGACCCACTGATTCACAAAAACTCTGATGCATGTCATGTAAAGAAAGACGTTTCCCAAacgctctctttttttgtgcatactGATATACCTTAGGGAGAAATTTATAAGGTTTGTTATAAACATGGTGTAATATTTATCTTGGAACAGATGCTTTGGGGCctttcatttaaaaccaaacaGGCTGTGCAACcgcataataaataat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72281 True 239 lncRNA 0.37 1 256547 256785

Neighbor

gene id symbol gene type direction distance location
LOC122349836 NA coding downstream 232844 23604 ~ 23703 (-)
LOC122348751 sh2b3,LOC107594562,LOC107550292 coding downstream 241473 8263 ~ 15074 (-)
trnan-guu_33 NA coding upstream 23997 280782 ~ 280855 (-)
tifa tifab,LOC107742334,LOC107692005,LOC107659708,LOC107753989,LOC107588127 coding upstream 26548 283333 ~ 285000 (-)
tnfsf10l LOC107691962,LOC107562848,LOC107742295,LOC107701536,LOC107753950,LOC108410411,LOC103041464 coding upstream 83040 339825 ~ 358332 (-)
si:dkey-171c9.3 LOC107692004,LOC107742319 coding upstream 105238 362023 ~ 367395 (-)
gpr185b gpr185b,LOC107669001,LOC107562838,LOC107588216,LOC107742332,LOC107691958,LOC108267436 coding upstream 289318 546103 ~ 553394 (-)
G48802 NA non-coding downstream 15000 239294 ~ 241547 (-)
G48781 NA non-coding downstream 18370 194136 ~ 238177 (-)
G48786 NA non-coding downstream 21030 190388 ~ 235517 (-)
G48795 NA non-coding downstream 39076 215351 ~ 217471 (-)
G48743 NA non-coding downstream 83534 172294 ~ 173013 (-)
G48824 NA non-coding upstream 22699 279484 ~ 280349 (-)
G48817 rbm4.3,LOC107742300,LOC107562822 non-coding upstream 30470 287255 ~ 308325 (-)
G48816 LOC107742299 non-coding upstream 35070 291855 ~ 294469 (-)
G48825 NA non-coding upstream 52259 309044 ~ 336585 (-)
G48895 NA non-coding upstream 279317 536102 ~ 579489 (-)
si:dkey-112a7.4 si:dkey-112a7.4 other downstream 42862 211341 ~ 213685 (-)
G48823 LOC107667730 other upstream 13584 270369 ~ 274498 (-)
LOC122348397 zgc:92429,LOC107588137,LOC107753943,LOC107668941,LOC103044742,LOC108434854,LOC108267498 other upstream 562852 819637 ~ 829670 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other upstream 623801 880586 ~ 888958 (-)
zgc:153151 NA other upstream 784137 1040922 ~ 1046317 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other upstream 913196 1169981 ~ 1220893 (-)

Expression


Co-expression Network