G49133 (LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219)


Basic Information

Item Value
gene id G49133
gene name LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 1169981 ~ 1220893 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU72772
TCCATCCTACGGTGCTCCGTGAATGACAATAGACCTCAAAAACGCATTCGACGTTCCGCAGCGAATCTGCGTCCTGAACAGGAGGGCGGTGGTTTGACTAACGGTACTACTGTCTTTATCAGACACTACAGGTGTTGTGTGTACGGTGATGCTGCGCGACAGTATGAGGCCAAGCGGAGCTCTGGCGACtgtgatgctgctgctgctgatccAGCTTCTGTGCTTCAAACCCGTTCATGCCGAGGAATCAGGGACGGTCATCCCCGCCGAGAGCCGACCGTGTGTTGATTGTCATGCCTTCGAGTTCATGCAGAGAGCCTTGCAAGACCTGAAGAAAACAGCTTTCAACTTAGACTCACGGACGGAGAGTTTGGTGCTGAGGGCCGAGAGGAGGGCACTGTGTGACTGCCTGCCTGCCAGCAGCCTGCGCTAAAAATCAGCTGTACACACTGCACTCTGACATAGAAATCTTTATATAACTAAAGGATACTACCTGCTCtctccgtcacacacacactctttcactcGCTCTCAAACATGTCCCCCGTCACATGTTACATGAAGCGTTTTACTTTTCATTGTAATTTGTGCGTAGAGcatcatatatacacattccTGACTAAAGAAGTCAAAATGCAACATTCCACAGTTTAATGTCAATATTTAGAGGCACATACATATTATAGCAGCAGCTAATACATCAACTTTGCATAAGTGTGTATAAAGAGAAAGGGTAAGTTTTTCCTCTCCAGGCACAATACACTGCAAAATATACTGCAAATATTACACGCattatttatcataaatatttgcACAGTacattgttttgggttttttttcaaatgtaaacttgctttttatatttgtgttctAGAAATATATGATTAACAGTCAAGATAGTCGAGCAGatattagatttattaaatattaaaatttaaatgtagatCTTCAGGCGTTGTTTTAGAGAGTTTGCTGATTGTTAGATGATAGATATATGGGTAGAAAAGTATCTGCATGTAAAGTGATAGTCTACAATTTTATATGAGAATTATGAAGGAGGAATAAGAAGGGATGGTTTCCTATAGAGATTACTTTGGTACTAAGATGTAAGTTCACACCTGTAACATTGTCTTTTTGTGTGTTGAGAAAGTGCATTAAAACATATGTGatgttgtatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaacaacaacaacacagaaataaagtgcattctttgtatatacatttctagTGTTCGTTTGAAAGAACAGTTGAGGATAAGGCATTCAGACTGACCTTGGTAACCTGCATGAAAGAGATGGCTGCTAAGAATGTTTGACTTAACGGAGGAGAAGGGAGTCCGAGAAAATCCACAATGGTAGATGGACCTGCTTCATCACTGACACCCTTTAGGTGATGCATGGATCAAGCCAATGCATCAAAGTGTGGAGCTGCTCCCTTCTCCCTTTATTTTCTAGTTTGAAAGCACTCCCTTAATTGTGGCTTCAAGTGGCAAGGAGTTAGTGGCACTTGTTGCACAATTGTAtggttattttctttttctaaataagTTTGTCTCGTACGCTTATCTACGATCCACTACAATGcattaacagtatttttttgaaTTCATGATTGCCAAAGTCGAGATATTTGCtgtatttcattacatttcttttgcCGTTTGTCTTTTAAGATGTTGTCACAACTCTTCTTTGTAGAATTCATTTGGAAATCAAGCCTATGTGCCATTTTATCAAGCAATAATACAAAGAATcacagttgaaaaaaaataacacataagATCCATgagattataaaaatgttaaaatgctgcATTGATGTTCAATCCCTCATACTTTACTGGTGACAGTCGCTCAGATGTTATTAGTATTGGCACAGCAACATCACCACAGGCAAGCCAAGGCCTGACAAGGTGTGaatgtgaattttatttttttgtatattctcattatgttttatattttctcgATTCTAATTACAACTAACATGTTTACTTGCATCTTGAATTCTTCAGTTTACGGTGTTTATGTTGTACTGATGTGACGCCtgcaaaaataagtaaaaaaccTTTGTGACTGGGTGTCATGGGCCTCTGAAAGTTGCGCCAAGCTCTGAACCACGATTGATCAGTCTCAAATATCCACTGTCTCCTGATTCACAAGGAGTACAGTCTCCAAAAATCTGTGACAATGATCAAAACATGAGAAATCTAAACCACGCAACCAGTTTTACAAATGGCGCAATACGCACAGGTTCAtattaataaagcttttatgatttttcttgaaataaaaaacaattaaccttttttattaacattttaatatgtgtaaagctgtaaagtgtaatttactgtaaatagcATTTGGGGACATTTTATGATCAttttgtaacagaaactatatgaatataactaagatgtttacaaaaaagaaaaaaacaacaacaatacactTTGGGAAACAACTGCAAACTGAGACACAATTCTAACTATACAATCAGCTTATGTTTGTGCCAGTCAGAGCAATAGCAACTTTCAGAGACCCTGTATCCTCTAAGGACTTATTATGGGCTTTTAGAAGCATTGTAAAGTGCTGGTGGGTTACTAATTATTGTAAATTACTGCTAATTTACGGGTAAATCCCTGGAAATACTTTGGAAATGTATGGCACTTAAAAGATAACTTCACATGTTGGCAGTAACACTTTTTCTTTGCTCATGTTTACAATTTCTGGAGTAAGTTGGTATTACTTGCCCCATTTATGTCAGCGTGGTCACATTTCAGTCATTGGCTGCCTGTTACTATAGAAACAAGCCCACACAAAGCACAGCAGGGAAATGATATGCAGCCATACATGGAGGCAGGGTCAGGAGCCACAAATGGGGCCGAGTCTAGTATAATAATGAGGGATGAGTAGAACTGAGCTTGAGGGTTTCATTATGGTGAATCTGACCTTGCTCTGCCTGTTTGGTTGCAGTGATCACCTGGTTCTTTGAGTCTGAAATCATTGTACTGCCTGAGTTTCCTTTggagtttattttaaactgctgtTTAAGTTACCCcccttttctttcatttcctcAGTACACAGGAACTTTGTAAAGatgtaaagaaaagttttcCTGATTTATGAAAGAAAAGGATGTACATACTGTATCAATTAAAGGAACGATTCATAAAGCTTGTAaaaaaaaaaaaaaaagcacaaa
>TU72774
TCCATCCTACGGTGCTCCGTGAATGACAATAGACCTCAAAAACGCATTCGACGTTCCGCAGCGAATCTGCGTCCTGAACAGGAGGGCGGTGGTTTGACTAACGGTACTACTGTCTTTATCAGACACTACAGGTGTTGTGTGTACGGTGATGCTGCGCGACAGTATGAGGCCAAGCGGAGCTCTGGCGACtgtgatgctgctgctgctgatccAGCTTCTGTGCTTCAAACCCGTTCATGCCGAGGAATCAGGGACGGTCATCCCCGCCGAGAGCCGACCGTGTGTTGATTGTCATGCCTTCGAGTTCATGCAGAGAGCCTTGCAAGACCTGAAGAAAACAGCTTTCAACTTAGACTCACGGACGGAGAGTTTGGTGCTGAGGGCCGAGAGGAGGGCACTGTGTGACTGCCTGCCTGCCAGCAGCCTGCGCTAAAAATCAGCTGTACACACTGCACTCTGACATAGAAATCTTTATATAACTAAAGGATACTACCTGCTCtctccgtcacacacacactctttcactcGCTCTCAAACATGTCCCCCGTCACATGTTACATGAAGCGTTTTACTTTTCATTGTAATTTGTGCGTAGAGcatcatatatacacattccTGACTAAAGAAGTCAAAATGCAACATTCCACAGTTTAATGTCAATATTTAGAGGCACATACATATTATAGCAGCAGCTAATACATCAACTTTGCATAAGTGTGTATAAAGAGAAAGGGTAAGTTTTTCCTCTCCAGGCACAATACACTGCAAAATATACTGCAAATATTACACGCattatttatcataaatatttgcACAGTacattgttttgggttttttttcaaatgtaaacttgctttttatatttgtgttctAGAAATATATGATTAACAGTCAAGATAGTCGAGCAGatattagatttattaaatattaaaatttaaatgtagatCTTCAGGCGTTGTTTTAGAGAGTTTGCTGATTGTTAGATGATAGATATATGGGTAGAAAAGTATCTGCATGTAAAGTGATAGTCTACAATTTTATATGAGAATTATGAAGGAGGAATAAGAAGGGATGGTTTCCTATAGAGATTACTTTGGTACTAAGATGTAAGTTCACACCTGTAACATTGTCTTTTTGTGTGTTGAGAAAGTGCATTAAAACATATGTGatgttgtatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagcacaaa
>TU72777
TCCATCCTACGGTGCTCCGTGAATGACAATAGACCTCAAAAACGCATTCGACGTTCCGCAGCGAATCTGCGTCCTGAACAGGAGGGCGGTGGTTTGACTAACGGTACTACTGTCTTTATCAGACACTACAGGTGTTGTGTGTACGGTGATGCTGCGCGACAGTATGAGGCCAAGCGGAGCTCTGGCGACtgtgatgctgctgctgctgatccAGCTTCTGTGCTTCAAACCCGTTCATGCCGAGGAATCAGGGACGGTCATCCCCGCCGAGAGCCGACCGTGTGTTGATTGTCATGCCTTCGAGTTCATGCAGAGAGCCTTGCAAGACCTGAAGAAAACAGCTTTCAACTTAGACTCACGGACGGAGAGTTTGGTGCTGAGGGCCGAGAGGAGGGCACTGTGTGACTGCCTGCCTGCCAGCAGCCTGCGCTAAAAATCAGCTGTACACACTGCACTCTGACATAGAAATCTTTATATAACTAAAGGATACTACCTGCTCtctccgtcacacacacactctttcactcGCTCTCAAACATGTCCCCCGTCACATGTTACATGAAGCGTTTTACTTTTCATTGTAATTTGTGCGTAGAGcatcatatatacacattccTGACTAAAGAAGTCAAAATGCAACATTCCACAGTTTAATGTCAATATTTAGAGGCACATACATATTATAGCAGCAGCTAATACATCAACTTTGCATAAGTGTGTATAAAGAGAAAGGGTAAGTTTTTCCTCTCCAGGCACAATACACTGCAAAATATACTGCAAATATTACACGCattatttatcataaatatttgcACAGTacattgttttgggttttttttcaaatgtaaacttgctttttatatttgtgttctAGAAATATATGATTAACAGTCAAGATAGTCGAGCAGatattagatttattaaatattaaaatttaaatgtagatCTTCAGGCGTTGTTTTAGAGAGTTTGCTGATTGTTAGATGATAGATATATGGGTAGAAAAGTATCTGCATGTAAAGTGATAGTCTACAATTTTATATGAGAATTATGAAGGAGGAATAAGAAGGGATGGTTTCCTATAGAGATTACTTTGGTACTAAGATGTAAGTTCACACCTGTAACATTGTCTTTTTGTGTGTTGAGAAAGTGCATTAAAACATATGTGatgttgtaaaaaaaaaaaaaaaagcacaaa

Function

NR:

description
PREDICTED: neuropeptide-like protein C4orf48 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72772 True 3243 lncRNA 0.38 6 1169981 1220893
TU72774 False 1244 TUCP 0.39 6 1169981 1220893
TU72777 False 1198 TUCP 0.40 5 1169981 1220893

Neighbor

gene id symbol gene type direction distance location
ptgr1.1 ptgr1,LOC107562349,LOC107691929,LOC107753922,LOC107588162,LOC107668743 coding downstream 14571 1151924 ~ 1155410 (-)
ptgr1.2 LOC107588160,LOC107742329,LOC107753921,LOC566996 coding downstream 18383 1147485 ~ 1151598 (-)
txn LOC107691930,LOC107562389,LOC107753923,LOC107668769,LOC107588158 coding downstream 23655 1143179 ~ 1146326 (-)
slc7a8a slc7a8a,LOC107668787,LOC107742270,LOC107753926,LOC107691931,LOC107562402,LOC108267955,LOC106577803 coding downstream 91146 1062516 ~ 1078835 (-)
gmpr2 gmpr2,LOC107753927,LOC107668803,LOC107588154,LOC108440043,LOC108267954 coding downstream 109592 1055583 ~ 1060389 (-)
faah2b faah2b,LOC107691924,LOC107741466,LOC107563143 coding upstream 7276 1228169 ~ 1232967 (-)
pik3c3 pik3c3,LOC107691920,LOC107562280,LOC107741463,LOC107668661,LOC107749819,LOC107588167 coding upstream 39276 1260169 ~ 1270747 (-)
rgp1 rgp1,LOC107741481,LOC107588171,LOC107691996,LOC107749838,LOC107668635,LOC107563390 coding upstream 56317 1277210 ~ 1282243 (-)
calb2b calb2b,LOC107563379,LOC107691995,LOC107668624,LOC107749837,LOC107741475 coding upstream 76255 1297148 ~ 1305652 (-)
cmtr2 cmtr2,LOC107588175,LOC107691918,LOC107749817 coding upstream 89383 1310276 ~ 1315150 (-)
G49023 NA non-coding downstream 90789 1078963 ~ 1079192 (-)
G49011 NA non-coding downstream 173482 996084 ~ 996499 (-)
G49004 NA non-coding downstream 187219 982339 ~ 982762 (-)
G48985 NA non-coding downstream 222819 946464 ~ 947162 (-)
G48936 syt4,LOC107562593,LOC107742284,LOC107691948,LOC107588142,LOC107668880,LOC107753936 non-coding downstream 266081 899143 ~ 903900 (-)
G49186 LOC107691905,LOC107562132,LOC107750593,LOC107668381,LOC107588184 non-coding upstream 244296 1465189 ~ 1468013 (-)
G49210 NA non-coding upstream 276430 1497323 ~ 1517408 (-)
G49231 NA non-coding upstream 385978 1606871 ~ 1607083 (-)
G49239 NA non-coding upstream 477556 1698449 ~ 1698762 (-)
G49241 NA non-coding upstream 478413 1699306 ~ 1699636 (-)
zgc:153151 NA other downstream 123664 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 281023 880586 ~ 888958 (-)
LOC122348397 zgc:92429,LOC107588137,LOC107753943,LOC107668941,LOC103044742,LOC108434854,LOC108267498 other downstream 340311 819637 ~ 829670 (-)
G48823 LOC107667730 other downstream 895483 270369 ~ 274498 (-)
si:dkey-112a7.4 si:dkey-112a7.4 other downstream 956296 211341 ~ 213685 (-)
G49309 LOC107658783,LOC107708003 other upstream 677190 1898083 ~ 1898826 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other upstream 680697 1901590 ~ 1907162 (-)
chst10 chst10 other upstream 2217856 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 3045375 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 3063516 4284409 ~ 4284499 (-)

Expression


Co-expression Network