G49447 (dapk1,LOC107680553,LOC107755715,LOC107557602,LOC107700066,LOC107558027)


Basic Information

Item Value
gene id G49447
gene name dapk1,LOC107680553,LOC107755715,LOC107557602,LOC107700066,LOC107558027
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 2489010 ~ 2491915 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU73256
aaaaaatgtagtacaCTGTAAAGTCTGAGGAAGTATTAAGGACATTGCATTCAGAGACATGCGGACATAATATAAATAGAGCAATAATGTGAAGGTCTTGTGCAAAGAGATGACTGTACAAGTCTTAAATACACCAGGATAAATTCCCCTCTGATATACCCTGTTAAAGTCTTAAAGGGGGGAAATCATGAACCTTGACCACAGCTAAACAGCGAAAGAGCTCCATAATACATAGACTTAaccacaatataaaaatgtgcctTTTGGAATGAGAGAACAAAATATGCCCGATTCCCTTTTAGAACAGTTTGTGATTTTAAGCCTGCCAGGGAAATGATGATAAGCTTGAGGATAGACCTGTCCCAAAATATAATATGGAACAGTTGTCTGGACTttcagacattaaaaaaaagacgaTGATGAAACTACAACAGTCTCGTAAGAAGGAGAGCAAAAGGAGTCGTAGCATGTGTTAGAAGTAACAGAGTTTGCTGCCATCTACAGTTTTCAAGTTGTCACTTCATTTGTATCCAATACACCACATTCATTACGGTTTTCCTGTAACTAAAGAATGGCATcgcttttaacagttttaacgCAAAATGTCAACATATTTTATGACGCTTCTGCCAAATTAAGTCCCTTAGAATAGCATTAATTCTCCAGTGTAAAGAATTCAAACgactgtttaaaatacatttctttaaacgaTCAACAAACAGTGTAAATGTGTGAAACgggatatattaaaataagcgGAACGATTGTAACAAAGATCATGCTCATCAGGACACTGCAGCAGACATcatttttatgaagaaaaactaaatattacttGTCATGTAAGTGCCTGGAATATTTCATCATTTCCATTTGACAGGTAGTCGgaactgtaatatttcacaaaagtgACAAGTAAGCTACAAGTGTGAATGAGACAAACATGAGGGATTAAAAACCAGACATTTTACCATGCATTTTGagttttaaaggaatgtttagtatgtgtgtttgtgcttcgACATTTGGATAAAATCCTGTCTGAAAATGACGCGTGTTAGTTGCAACAAGGAACGATCAGGTAGTAAATGCGAACGACTCAATTTTGTACCgatttttttacgtttaaaaAGTGTAAATCTAATAGATATGTTCGTTAAAAGCTTCGTAAGACAGGTAAACACCGAAACACTTGCAGAGATGCACATCCAATTTTGAAATCTATAACAATGGCTCTTTGTCAATAGCTTACCATCTTCAAGGCACTCAATAGCTTGAGTCGTTTATTAAACAATGCTGCCAAGCACTTAGTGATCCATCATTCGGTCATCAAATTTAGCGCAAATCCCCTATAACAGCTGTCCGAATTTATAAAAGTGATGGAATTTTCTTTCAGTAAGGCCGTTTCACCTTGGGAATGTGAGACAGTCAATAAAAggtttgcagaaaaaaaaagcacataggCACCTTTTCAAAGACACCGAGAATGAACATTCAGAAATCGCGAAGGGCAACAAAATGGACATGAGCAGAGTATCTGATTCAAATACTTCAGTCTCGGGAACACCAAGGGAGCTCGAGCTTGAACACCGCTCCGCCGGTCAATTGCACGTTTCTCTATAGACACACAAGTGACGTCCTAACGAGAGATCACCGAACTGATGGAGTTGAAGGATGTGCCGCCCCCGAAATCTGCCGCATCCCGGCGGCCGAGTTCTCGCAACTTAGCGACCAAAATGCCTATGGTTGAATCGGGTCGCTGGCTCCACTCCTGGAGGAGCGTGGCTGTGGGACTGGGAAGGGAAAGGGGGTCTGCGGGCGGGATTCCGTTGGTGCCAGAACTGTATTTAGCAGCGAGCTCGCTAAGGCCCAAGTTCATGGCAAGCAGGCACCAGTCTTTTCCGAGGGCATCGGGAGGGTCCAGCAGGCGGCAGAGCTTGCGTCGAGCCAGGTGACCGACCTCCGCCACGGCCACTTCCCCTCCAAGACTGCCCTGTTTGTAGACCTGGGTGCAACCTAATGCTACGATACTGACAAAGCTCTCGCGATAGCCGCCCATGGTGTTCGAAAGCGCGTTCTCGCCTCGCGCCTGAGCGCGGAAAAAGTCTCTCGGTTGGTAGAGCATGACGGGGCCGTGGTGTTCCCGCAGCTGCTGAGGGCTAAGATAATGCCGGGCGGTAAGCAAACCGGGTAACGTAGCAGCTAACAGACCCTCTGCCATGCCGCACAACGTGTCCAATAAAGCATAGCAACGTGAGGGATTCGAATCAGGTCCTCGTAACTGTACCTCCATGCCCTGGCCGTGGTTCACAAGCAGAACCAGTGCCTCAGCGCCGCCGAGTCCAACACGAGCTCCGCCGCTCCACAACCTCACATCCTCAGCCTCCACCTCTGGCTTCTGCTGCCGGCTCCACCTGCACAAGTTCACTTGGAGCTTATGGAAAAGTCCACAAGGGAATGGAGCCAAGTGCTCCGCAGGGACAACGCGCACGCCACCGTAAAGCAACGTGTCCTCGCCTTCGATGTCTTCCTCATCCGTCCAGGTGTGCTGTAGGCCACCCGTGCGTATGAGGGCGGGAATGTCCACCATTCCCGGGTTGGCTAAGTCGCGGGCGCATACATCCATGGCGTCGAGCACCTGGAGAAGTTCATCGATGTCACCTTCGGAGACGAGGTTTTGGAGTTCTTCTATGCGGTAGCGGCCACGGTAGTGGTGGATTGCTTTGGGTGTTTCAATCGAGAGAAGTTTGCCGAGAACATTACCGCAAAGCCAGCGAGGATCTAACAGGACGACGTCTTGGACAGTCTCACTCTGCATGATGTTG

Function

symbol description
dapk1 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within apoptotic process; protein phosphorylation; and signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in urinary bladder cancer. Orthologous to human DAPK1 (death associated protein kinase 1).

NR:

description
PREDICTED: lamina-associated polypeptide 2, isoforms beta/gamma-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73256 True 2825 lncRNA 0.46 2 2489010 2491915

Neighbor

gene id symbol gene type direction distance location
gas1a gas1a,LOC107680573,LOC107755728,LOC107557610,LOC107727450,LOC107558025,LOC107700065 coding downstream 142228 2344884 ~ 2346782 (-)
LOC122349155 tars,LOC107755726,LOC107680583,LOC107700064,LOC107727452,LOC108255896 coding downstream 281910 2195998 ~ 2207100 (-)
LOC122348911 LOC107707953,LOC107707085 coding downstream 452544 2020260 ~ 2036466 (-)
LOC122349140 NA coding downstream 471662 2010868 ~ 2017348 (-)
LOC122348468 LOC107707987,LOC107555888,LOC107707097,LOC107662203,LOC107658968,LOC107590514 coding downstream 567968 1907473 ~ 1921042 (-)
fbp2 LOC107557612,LOC107755732,LOC107680540,LOC107727448,LOC107700070,LOC107558028 coding upstream 7023 2498938 ~ 2504580 (-)
fbp1a fbp1a,f16p1,LOC107557613,LOC107700071,LOC108426201,LOC103033769,LOC107727435 coding upstream 13654 2505569 ~ 2510033 (-)
npffr2a npffr2a,LOC107697256,LOC107755724,LOC107719191,LOC107574064,LOC107700061,LOC103039748 coding upstream 292453 2784368 ~ 2798162 (-)
slc4a4a slc4a4,LOC107755741,LOC107700079,LOC107747688,LOC107685251 coding upstream 339911 2831826 ~ 2881239 (-)
ifngr2 NA coding upstream 393344 2885259 ~ 2888147 (-)
G49444 NA non-coding downstream 3811 2484544 ~ 2485199 (-)
G49424 NA non-coding downstream 22724 2366393 ~ 2466286 (-)
LOC122349160 NA non-coding downstream 23948 2411671 ~ 2465062 (-)
G49423 NA non-coding downstream 123920 2364807 ~ 2365090 (-)
G49422 NA non-coding downstream 141811 2346855 ~ 2347199 (-)
G49440 ctsla,LOC107755730,LOC107680563,LOC107557611,LOC107558029,LOC107727441 non-coding upstream 2100 2494015 ~ 2497899 (-)
G49450 NA non-coding upstream 19641 2511556 ~ 2522869 (-)
G49453 NA non-coding upstream 41307 2533222 ~ 2533643 (-)
G49455 LOC107755731,LOC107680527,LOC107557614,LOC107727443,LOC107700068,LOC107558030 non-coding upstream 50685 2542600 ~ 2545233 (-)
G49457 NA non-coding upstream 56649 2548564 ~ 2549190 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other downstream 581848 1901590 ~ 1907162 (-)
G49309 LOC107658783,LOC107708003 other downstream 590184 1898083 ~ 1898826 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 1268117 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 1442693 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 1600052 880586 ~ 888958 (-)
chst10 chst10 other upstream 946834 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 1774353 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 1792494 4284409 ~ 4284499 (-)
LOC122349098 NA other upstream 1861146 4353061 ~ 4360979 (-)
G50107 NA other upstream 2041131 4533046 ~ 4574002 (-)

Expression


Co-expression Network