G49450


Basic Information

Item Value
gene id G49450
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 2511556 ~ 2522869 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU73259
AGAAAGCCCACGGTTTTCAGAGCTCACGTTCTCCAAATATAATGTGCAGCCGGAAACTCTAACAAGTGACAAGCACCGCCTtttttttccaaacaaattTGATTATACGTCCCTCTCCCGTCCCTGCGCTCCCTTTGTAAAAGTCCCAGTGAAGCGTCCTCTTCGCTCATGCGCACAAGAGCAGCACGAGCCGCTGAACTCGACCCGAGGCACAATACATGTTCCCTGACGTGGGACGGAGAGCGTGACGTACAAATAAGTGAGTCCACAAAGGCAGGTGCTCCTCTCACTGCTTACTAGATCAGCAGAGCCGC

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko03030 DNA replication
ko03460 Fanconi anemia pathway
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
TU73259 True 314 lncRNA 0.52 2 2511556 2522869

Neighbor

gene id symbol gene type direction distance location
fbp1a fbp1a,f16p1,LOC107557613,LOC107700071,LOC108426201,LOC103033769,LOC107727435 coding downstream 1523 2505569 ~ 2510033 (-)
fbp2 LOC107557612,LOC107755732,LOC107680540,LOC107727448,LOC107700070,LOC107558028 coding downstream 6976 2498938 ~ 2504580 (-)
gas1a gas1a,LOC107680573,LOC107755728,LOC107557610,LOC107727450,LOC107558025,LOC107700065 coding downstream 164774 2344884 ~ 2346782 (-)
LOC122349155 tars,LOC107755726,LOC107680583,LOC107700064,LOC107727452,LOC108255896 coding downstream 304456 2195998 ~ 2207100 (-)
LOC122348911 LOC107707953,LOC107707085 coding downstream 475090 2020260 ~ 2036466 (-)
npffr2a npffr2a,LOC107697256,LOC107755724,LOC107719191,LOC107574064,LOC107700061,LOC103039748 coding upstream 261499 2784368 ~ 2798162 (-)
slc4a4a slc4a4,LOC107755741,LOC107700079,LOC107747688,LOC107685251 coding upstream 308957 2831826 ~ 2881239 (-)
ifngr2 NA coding upstream 362390 2885259 ~ 2888147 (-)
poc5 poc5,LOC107755745,LOC107747692,LOC107565674 coding upstream 380560 2903429 ~ 2911287 (-)
f2rl2 LOC107685249,LOC107561621 coding upstream 440796 2963665 ~ 2966561 (-)
G49440 ctsla,LOC107755730,LOC107680563,LOC107557611,LOC107558029,LOC107727441 non-coding downstream 13657 2494015 ~ 2497899 (-)
G49447 dapk1,LOC107680553,LOC107755715,LOC107557602,LOC107700066,LOC107558027 non-coding downstream 19641 2489010 ~ 2491915 (-)
G49444 NA non-coding downstream 26357 2484544 ~ 2485199 (-)
G49424 NA non-coding downstream 45270 2366393 ~ 2466286 (-)
LOC122349160 NA non-coding downstream 46494 2411671 ~ 2465062 (-)
G49453 NA non-coding upstream 10353 2533222 ~ 2533643 (-)
G49455 LOC107755731,LOC107680527,LOC107557614,LOC107727443,LOC107700068,LOC107558030 non-coding upstream 19731 2542600 ~ 2545233 (-)
G49457 NA non-coding upstream 25695 2548564 ~ 2549190 (-)
G49456 NA non-coding upstream 27571 2550440 ~ 2554369 (-)
G49550 NA non-coding upstream 289749 2812618 ~ 2813121 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other downstream 604394 1901590 ~ 1907162 (-)
G49309 LOC107658783,LOC107708003 other downstream 612730 1898083 ~ 1898826 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 1290663 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 1465239 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 1622598 880586 ~ 888958 (-)
chst10 chst10 other upstream 915880 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 1743399 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 1761540 4284409 ~ 4284499 (-)
LOC122349098 NA other upstream 1830192 4353061 ~ 4360979 (-)
G50107 NA other upstream 2010177 4533046 ~ 4574002 (-)

Expression


Co-expression Network