G49455 (LOC107755731,LOC107680527,LOC107557614,LOC107727443,LOC107700068,LOC107558030)


Basic Information

Item Value
gene id G49455
gene name LOC107755731,LOC107680527,LOC107557614,LOC107727443,LOC107700068,LOC107558030
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 2542600 ~ 2545233 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU73264
CTTTTAAGGTGTGGTCTGAgttatctgtctgtctcaggTGGTCCATATTGGAAAGTTCCTCAACACTTCCATACTTCATTACTGAATTGATGGATGATAGAGTAGTAACCAGCTCACTATTGATGGAGCTAAACTGGGATTGTTGAGGTGGGCCGAATGCATCTGCCAGCTCACTGTAGTTCTGAGCAAGCAACATCTGCTGTTCCTGCAAGAGCTTCTGCACTCTCTCTATGTAGTGATCGAGTCCCACACCTGCCCCAGGCTGAGAGTGGATGGGTCCTGCTGATGACAGTGATCCCACAGGAACACTCTCAAGTTGGATCAAGGTGGGAGACTGAGAAGGGCCACATGCAATGTTCCTTGTCTTGTGACCGActaaaaagttttcatttatgttCGTGAGGCCAACTCCGGTCTCTTTGGTTTTGTAAGACGGCGACTTGTCATGAATACCTTCTTCAGATGCTGTTGTACCTACTGAAACAGAGCGCATTTTTAATGTGGCCGGCACATCTTTCACAAGTCCATCGCCAATGGCAATTGTACGGGTCTCCACTGGTACAGTGTTAACTTGTTTGTCTTTTGAGTATGGTTGTGTAGTGGTGCAAGAATCAGTAAGAACTACCTTGTCTGTATTGGTTAACTTGCCTATTGTTTCAATTTCTGTATTTGTGTACTGTGAGGCACACATGGGTAAGACCATGACTCCAAAGTCAGTTCTGTGAACTTCATCTGTTGCTGTGCTCTGGGTTGCCATCTCCTTGATAGGCCTGACTATTACATCAACTGAACAATCTCCACATCCAATAGACCTGAATTCCTTGGCTTGTTCAGCCTCTGTTTTGCATAGTCCTAAACCTTCTGCTGTTAATTCTGTGTTGATGCCCATTTCACATACACTTAATTCCACTCCCACACCCTGGTTGCACATCACAACCTGTCTGCCAACACACTGTTCCTTGACTTCTGCACGTTCTCGTATAAGCCACCGCTCCATTGGCAACTCTGGACCCACTGAAACATGCCTTGCCTCTGGTTTGCAAATAATGCCTACTGAATTCATTTGTTGGACATGATTTGTGCTTGCGTTGCTAAACTCAATGTGGTTGCCCACACCTTGGCTCTGTGTGGACACTCTGGCCTCCACTGAAGTGCTGTACATCTCTGGCCTTGCCAATATTCCTTTGTCTGCCTTTTTTCGTGATCCGGCCTCTTGAAGCTGAAGTTTTAGCTTTCCCATTTCCATTTGGTGGGTGGTCTCCTTAAGTTGAACCTCCAGTCTGTAGATCTTCTCTTTCAGGGCTTCGATGGTCTGGTGCTGCATCTCAATTTCAGCTTCTACTTCACTGCTCATACCTAGCATTGCTTCAGTCACACCAACTCCTGTGCTCCTCAACTCCTGCTCTGTTCCCACAGCCACATCTCTGTTTTGCCCAGGTGATCTCCGATATACAACCACATTGTTCATGTTCTCATCAGCTCCGACACCAATGGACTTGCTCTCTCGTCTCCACTGCTGgacattttggtttgttttttcctctgttTGGTGTAAGCTGTGCTTCCTTTCCTCACCATCCTGCAGGTTTCTCTCCAAAGCCTGCACTTCAGCCGACAATTGCCTGAACTCTTGTAGCCTTTGAGTGGTCTGCTCAGTGTTCTCCATCTCCTCGATATGGAGTTCAGAGCCTGTCCTGAGCTGAGTCAGGGGCTCATACTGATCAGCACTGCCAACACTATAGGAGCGTTTCCTGAAACCTCCACCTGCACTCTGCCCTGCTACCTTGGAGTTCTTCATCTGGGACACTAGTTGCCTTTTCTCTTCTTGCAAGACTGAGATCTTGACCTGAAGAATTGGGATGGTCTTCACCTGCTCCTCTAGTTCTTTTAGTCTCTTTAGAGCCACTACCATCTGTTCTCGAATGTGCTGGAGGTGCAGCGGGCTAACATTGGTCACTGGTGTGGTCATGCCTGAGCTGAGGGGACTGTGGCGAATTGAACTGCCCATAGAGGATGTGAAGTAGGGATTGTATTCACCATTGCCTAGATGTCCATTATGTTGAAACGGATGTGAGCTGGGTGAAATCTGGCTTGGCCCATAGGAGCCACTGTAAGAGGACAGAGAACTGGAAGAGCCCATTCCTCCAAAACTGGCTAGTCGTCGACGAGGCGGCTCATTGACTGGTGGCTGCATCAGGAGCCGCTCCTGTTCCAGTCGCCTTCGCGTCTCCATCAGTGTTTTCTCCACCTGGGGGTTATGGCGAAGAAGGCGGGGAGAAGGTGGAGGCAGCAGCTGCTTGGTCTCTGGGACGTTCACAAAGGCTTGGGGAGCTTCATGGACTTGGGCAGTGTGGCCAGGGGGGGCTACCTGGTTCTGAGGTGTAAAGTAGACTGGTGACTGTTTGCTCTCATCACTGTTAGAAGAGGATAAGGAGTCTGTTGAAGTCCACTCAGTCTGGCCACTGCAACTACTCTGAGGCGGCGGCGCAGACCTGACCACTTTTGGCTTCCTTTGGATGTTTAGCTTCTTGATGGTGTTGCCCCTCTCGATGTCATCTACATATTTAAGGAAGTCCAGGTCTAGCTGATAACCATATGGGGTCTCCAAACAATAAGGGTCCTTCTCATCATCat

Function

NR:

description
PREDICTED: KN motif and ankyrin repeat domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73264 True 2634 lncRNA 0.48 1 2542600 2545233

Neighbor

gene id symbol gene type direction distance location
fbp1a fbp1a,f16p1,LOC107557613,LOC107700071,LOC108426201,LOC103033769,LOC107727435 coding downstream 32567 2505569 ~ 2510033 (-)
fbp2 LOC107557612,LOC107755732,LOC107680540,LOC107727448,LOC107700070,LOC107558028 coding downstream 38020 2498938 ~ 2504580 (-)
gas1a gas1a,LOC107680573,LOC107755728,LOC107557610,LOC107727450,LOC107558025,LOC107700065 coding downstream 195818 2344884 ~ 2346782 (-)
LOC122349155 tars,LOC107755726,LOC107680583,LOC107700064,LOC107727452,LOC108255896 coding downstream 335500 2195998 ~ 2207100 (-)
LOC122348911 LOC107707953,LOC107707085 coding downstream 506134 2020260 ~ 2036466 (-)
npffr2a npffr2a,LOC107697256,LOC107755724,LOC107719191,LOC107574064,LOC107700061,LOC103039748 coding upstream 239135 2784368 ~ 2798162 (-)
slc4a4a slc4a4,LOC107755741,LOC107700079,LOC107747688,LOC107685251 coding upstream 286593 2831826 ~ 2881239 (-)
ifngr2 NA coding upstream 340026 2885259 ~ 2888147 (-)
poc5 poc5,LOC107755745,LOC107747692,LOC107565674 coding upstream 358196 2903429 ~ 2911287 (-)
f2rl2 LOC107685249,LOC107561621 coding upstream 418432 2963665 ~ 2966561 (-)
G49453 NA non-coding downstream 8957 2533222 ~ 2533643 (-)
G49450 NA non-coding downstream 19731 2511556 ~ 2522869 (-)
G49440 ctsla,LOC107755730,LOC107680563,LOC107557611,LOC107558029,LOC107727441 non-coding downstream 44701 2494015 ~ 2497899 (-)
G49447 dapk1,LOC107680553,LOC107755715,LOC107557602,LOC107700066,LOC107558027 non-coding downstream 50685 2489010 ~ 2491915 (-)
G49444 NA non-coding downstream 57401 2484544 ~ 2485199 (-)
G49457 NA non-coding upstream 3331 2548564 ~ 2549190 (-)
G49456 NA non-coding upstream 5207 2550440 ~ 2554369 (-)
G49550 NA non-coding upstream 267385 2812618 ~ 2813121 (-)
G49551 gc,LOC107697255,LOC107700078,LOC107565678,LOC107747690 non-coding upstream 268148 2813381 ~ 2817960 (-)
G49552 NA non-coding upstream 275949 2821182 ~ 2828947 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other downstream 635438 1901590 ~ 1907162 (-)
G49309 LOC107658783,LOC107708003 other downstream 643774 1898083 ~ 1898826 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 1321707 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 1496283 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 1653642 880586 ~ 888958 (-)
chst10 chst10 other upstream 893516 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 1721035 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 1739176 4284409 ~ 4284499 (-)
LOC122349098 NA other upstream 1807828 4353061 ~ 4360979 (-)
G50107 NA other upstream 1987813 4533046 ~ 4574002 (-)

Expression


Co-expression Network