LOC122348141


Basic Information

Item Value
gene id LOC122348141
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 4266268 ~ 4268884 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU73950
GAAAACAGAAGAATGCAGCGTGTGAGATTCACGATCAAATCAGACACATCTCTGAACCAATCCACGGTGATGCAGGCCTTAGAGAAGAAGATGAACCAGATCCTCTCGGATCAGGACGTGAATATCAGATCCAGCATAACATGGATCATCCAACCCGACGGGAAGATCTTCCAGCggctgaaaacagaaaacacaccaCAGACGGCATGTAAGGTGTTATAGCAAAGGAAACGCTAAACTCTGATACGTGCCATAACTTGTGCATCTTTAAGGTAcaggcataataata
>XM_043243404.1
CTGAAAGTGTCTAAAACCCTTGAGTATAGCTGTTGggttttattccattttaattacacctacaacaacaacatcataatatcataaatgccaatataatgtcaaattaattttagacAAATTATAAATAGGACagagcaaaatatttttacagacaGGTTGGGATTACTATATTGTCATCCTGGAGCTTCTTCACCCTTCAATAAACATCCATGAGTCTGGATTTTCTGACCACAGgcattatttctaataatttttttacattctacCCATTCTTCTTTccatttttgtcttgtcttggTTGATTCATGGTTTATAACTGAGTTTTGCAttcactgtttttttctttttcttcttcttcatgttTTGCAGCCAGGTCTGCTTGTTGCTCATTTCCAATAAATCTCCTGACTATAGTGAAAACTAGTGCACTTTCAGAATCAGAAAACTAACCAGCCtgtcctttatttatttctttgaagaaACCTGTGAAGAGATGATGATGCAGAACAAGATTCAGCTTGTTGTTTTTCTCGCAGGAATTCTGTCGAAGGCTTCGTGTGACCTGCAGCGTTTTGTCCTGATCCAAGACCCAAAGACCTGGACAGAAGCTCAATCGTACTGTAGAAGGATATGCGTGGATCTGGCGACGGTTCAGAGCGATGAAGACATAACCAAACTAAAGGAGGCAGCGAACGCTGAGAACTTCCCATCTGACGCCTGGATCGGTTTCTCCAGAGATGTTTGGCGTTGGTCGTATCAAAACATGCCGGTCAGCAATGCAAAGTGGGATTCTTTTCAGCCAGATTTGCCCGACACAGATGTGGCCTGTGGGAATATAAACAGCAAAGGACGATGGGGTGACAGAACTTGTACTGACGCAGACAACTTCTTTTGCCAACTTGACAACCAGAACACACTTCAAGACAAGTTTGAGTACATCGACAGCGTGAGGTTAAGCTGGCATGATGCTCAAACGTACTGCAGAACACACTACACAGACCTGGCCGCCGTTACAGACGACGCAGAGAACACGTTCCTCGCGAGCGAGCTTTCTTCACGGAACCTCAACGACGCCTGGTTCGGCCTGTACAGGATCCCATGGCTGTGGTCAGATAACAGCGGTGTCTTGTGGTCCTCCGTGAAGTGGAAGTCTACGCAGCCTGATAACTTGAACGAAATCCAGTGTGCGAGAGCCAACCCTGGAGCACTGATGGTTAAAGACAACTGCTCCACTCCACTGCCTTTCTACTGCCGTGAAAACAGAAGAATGCAGCGTGTGAGATTCACGATCAAATCAGACACATCTCTGAACCAATCCACGGTGATGCAGGCCTTAGAGAAGAAGATGAACCAGATCCTCTCGGATCAGGACGTGAATATCAGATCCAGCATAACATGGATCATCCAACCCGACGGGAAGATCTTCCAGCggctgaaaacagaaaacacaccaCAGACGGCATGTAAGGTGTTATAGCAAAGGAAACGCTAAACTCTGATACGTGCCATAACTTGTGCATCTTTAAGGTAcaggcataataataataataagttaccTTCATTTAATGAATACGGTCAGTGCATAGCAACTTATAACAATAATcatggtaatatatatatatatataaatatattaggcattattattgcatttgtttacaaaatgttttttcacttttaagatATCAGGTAAAAATATAGCTTGTATCTATTAAGTACACATTTTGTTCTTTAATCTGTTTGATGCGAGACATGGGAAATAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73950 False 289 lncRNA 0.45 2 4266489 4266984
XM_043243404.1 True 1768 mRNA 0.41 4 4266268 4268884

Neighbor

gene id symbol gene type direction distance location
LOC122349601 alpk1,LOC107572659 coding downstream 71787 4186569 ~ 4194481 (-)
LOC122349599 LOC107740753 coding downstream 79875 4183344 ~ 4186393 (-)
cckbra si:dkey-1h24.2,LOC107654252,LOC107705035,LOC107707829,LOC107719744,LOC107588854 coding downstream 218228 4026499 ~ 4048040 (-)
LOC122348644 LOC107654241,LOC107588857,LOC107712541,LOC107667649,LOC107742657,LOC107552376 coding downstream 418676 3841753 ~ 3847592 (-)
LOC122348642 LOC107712540,LOC107654240 coding downstream 424407 3836016 ~ 3841861 (-)
dctn1a dctn1a,LOC107665752,LOC107748035,LOC108260758 coding upstream 27756 4296640 ~ 4317720 (-)
LOC122349101 LOC107670400,LOC107665746 coding upstream 57282 4326166 ~ 4331769 (-)
LOC122349213 LOC107740765,LOC107665753,LOC107571598,LOC107748032 coding upstream 74218 4343102 ~ 4345819 (-)
LOC122349105 LOC107740765,LOC107571598 coding upstream 105317 4374201 ~ 4377134 (-)
LOC122349112 NA coding upstream 117654 4386538 ~ 4395999 (-)
G49926 NA non-coding downstream 130847 4091025 ~ 4135421 (-)
G49890 NA non-coding downstream 216161 4048607 ~ 4050107 (-)
G49880 NA non-coding downstream 239953 4022642 ~ 4026315 (-)
G49867 NA non-coding downstream 346635 3919365 ~ 3919633 (-)
G49863 NA non-coding downstream 361001 3905055 ~ 3905267 (-)
G49961 NA non-coding upstream 19419 4288303 ~ 4290077 (-)
G49934 NA non-coding upstream 24163 4293047 ~ 4294551 (-)
G49966 NA non-coding upstream 52255 4321139 ~ 4321706 (-)
G50091 NA non-coding upstream 95776 4364660 ~ 4369767 (-)
LOC122349221 NA non-coding upstream 150589 4419473 ~ 4420476 (-)
chst10 chst10 other downstream 800682 3438749 ~ 3465586 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other downstream 2359106 1901590 ~ 1907162 (-)
G49309 LOC107658783,LOC107708003 other downstream 2367442 1898083 ~ 1898826 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 3045375 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 3219951 1040922 ~ 1046317 (-)
trnar-ucu_8 NA other upstream 15525 4284409 ~ 4284499 (-)
LOC122349098 NA other upstream 84177 4353061 ~ 4360979 (-)
G50107 NA other upstream 264162 4533046 ~ 4574002 (-)
LOC122349182 lpcat4,LOC107698138,LOC107574180,LOC107720499 other upstream 757061 5025945 ~ 5029603 (-)
G50246 NA other upstream 1104509 5373393 ~ 5375111 (-)

Expression


Co-expression Network