G27890


Basic Information

Item Value
gene id G27890
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 5297511 ~ 5297995 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU31523
CGATAAGTTACGGTAACTCAAACCATTTGAGGAAACCGATTGCCTTAAACTATTTAAGTTTTAAAACCAATAAGTATGACTACTGTATACTCATACATTAAGTTAAATTCACTTATATTTTAGTGTTTAGTCAATCATTAGCGTAAACTCAACTTAAAGGTTTTAAGTTTATTCCACTCATTCAGTTTGAATTCAGGTAACAAAAATCTAACTCTAACTCTAACTCTTGCTAAAATCTAAAGTCTTAGCAACTATATAGCGACTTAAATGGTTTGAGGAAATCGATTGCCTTTAATGGTTTAAGTTCATCAAACTCAAAGTAATAAAGTTACATAAGACTAAGCAAAAACTAACATTGGTACAAAACAATGATGACAGAACAGGAGCACTGTAAAACTCAATAAGTTCAGAATACTCAAAACATTTAAGTAAACAAGCAAATTTTTTTAAGTTAGTAGAACTTAAAATTTTTGTGACAAGTGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31523 True 485 lncRNA 0.29 1 5297511 5297995

Neighbor

gene id symbol gene type direction distance location
CI01000004_05232776_05234535 NA coding downstream 61984 5232429 ~ 5235527 (-)
CI01000004_05113181_05116553 AMY2A coding downstream 180933 5113162 ~ 5116578 (-)
CI01000004_05073667_05096493 NA coding downstream 200227 5072918 ~ 5097284 (-)
CI01000004_05001695_05020719 NTNG1 coding downstream 276704 5001617 ~ 5020807 (-)
CI01000004_04980768_04988531 NA coding downstream 307973 4980552 ~ 4989538 (-)
CI01000004_05318592_05325105 NA coding upstream 20597 5318592 ~ 5325105 (-)
CI01000004_05337445_05339997 NA coding upstream 38918 5336913 ~ 5340567 (-)
CI01000004_05355484_05357726 NA coding upstream 57271 5355266 ~ 5357799 (-)
CI01000004_05373464_05376608 CNN3B, CNN3.L, CNN3A, CNN3 coding upstream 75323 5373318 ~ 5376608 (-)
CI01000004_05482165_05486129 NA coding upstream 183651 5481646 ~ 5487860 (-)
G27873 NA non-coding downstream 43588 5253674 ~ 5253923 (-)
G27859 NA non-coding downstream 51937 5240346 ~ 5245574 (-)
G27755 NA non-coding downstream 88926 5206756 ~ 5208585 (-)
G27740 NA non-coding downstream 144193 5144569 ~ 5153318 (-)
G27685 NA non-coding downstream 333283 4961931 ~ 4964228 (-)
G28026 NA non-coding upstream 146028 5444023 ~ 5444465 (-)
G28033 NA non-coding upstream 172166 5470161 ~ 5470610 (-)
G28102 NA non-coding upstream 341725 5639720 ~ 5639941 (-)
G28103 NA non-coding upstream 343868 5641863 ~ 5642098 (-)
G28117 NA non-coding upstream 363005 5661000 ~ 5661223 (-)
G27746 NA other downstream 93787 5178227 ~ 5203724 (-)
G26788 NA other downstream 2021790 3267683 ~ 3275721 (-)
CI01000004_01773383_01774888 INSL5B other downstream 3522570 1772928 ~ 1774942 (-)
CI01000004_05617072_05627369 NA other upstream 322388 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 1236832 6538904 ~ 6541252 (-)
G29388 NA other upstream 1333298 6631293 ~ 6631907 (-)
G29656 NA other upstream 2666369 7964364 ~ 7965500 (-)
G29746 NA other upstream 3056503 8354498 ~ 8358127 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location