Gene
RNA
| Item | Value |
|---|---|
| gene id | G28026 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 5444023 ~ 5444465 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: COP9 signalosome complex subunit 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU31680 | True | 443 | lncRNA | 0.40 | 1 | 5444023 | 5444465 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_05373464_05376608 | CNN3B, CNN3.L, CNN3A, CNN3 | coding | downstream | 67415 | 5373318 ~ 5376608 (-) |
| CI01000004_05355484_05357726 | NA | coding | downstream | 86224 | 5355266 ~ 5357799 (-) |
| CI01000004_05337445_05339997 | NA | coding | downstream | 103456 | 5336913 ~ 5340567 (-) |
| CI01000004_05318592_05325105 | NA | coding | downstream | 118918 | 5318592 ~ 5325105 (-) |
| CI01000004_05248429_05300603 | ABCA4B, ABCA4 | coding | downstream | 143420 | 5248429 ~ 5300603 (-) |
| CI01000004_05482165_05486129 | NA | coding | upstream | 37181 | 5481646 ~ 5487860 (-) |
| CI01000004_05490354_05581387 | DPYDB, DPYD | coding | upstream | 45705 | 5490170 ~ 5581387 (-) |
| CI01000004_05617072_05627369 | NA | coding | upstream | 172179 | 5616644 ~ 5628289 (-) |
| CI01000004_05709639_05728550 | NA | coding | upstream | 264161 | 5708626 ~ 5728791 (-) |
| CI01000004_05803106_05809498 | NA | coding | upstream | 358392 | 5802857 ~ 5809498 (-) |
| G27890 | NA | non-coding | downstream | 146028 | 5297511 ~ 5297995 (-) |
| G27873 | NA | non-coding | downstream | 190100 | 5253674 ~ 5253923 (-) |
| G27859 | NA | non-coding | downstream | 198449 | 5240346 ~ 5245574 (-) |
| G27755 | NA | non-coding | downstream | 235438 | 5206756 ~ 5208585 (-) |
| G27740 | NA | non-coding | downstream | 290705 | 5144569 ~ 5153318 (-) |
| G28033 | NA | non-coding | upstream | 25696 | 5470161 ~ 5470610 (-) |
| G28102 | NA | non-coding | upstream | 195255 | 5639720 ~ 5639941 (-) |
| G28103 | NA | non-coding | upstream | 197398 | 5641863 ~ 5642098 (-) |
| G28117 | NA | non-coding | upstream | 216535 | 5661000 ~ 5661223 (-) |
| G29055 | NA | non-coding | upstream | 227287 | 5671752 ~ 5717681 (-) |
| G27746 | NA | other | downstream | 240299 | 5178227 ~ 5203724 (-) |
| G26788 | NA | other | downstream | 2168302 | 3267683 ~ 3275721 (-) |
| CI01000004_01773383_01774888 | INSL5B | other | downstream | 3669082 | 1772928 ~ 1774942 (-) |
| CI01000004_06539836_06541252 | NA | other | upstream | 1090362 | 6538904 ~ 6541252 (-) |
| G29388 | NA | other | upstream | 1186828 | 6631293 ~ 6631907 (-) |
| G29656 | NA | other | upstream | 2519899 | 7964364 ~ 7965500 (-) |
| G29746 | NA | other | upstream | 2910033 | 8354498 ~ 8358127 (-) |
