npffr2a (npffr2a,LOC107697256,LOC107755724,LOC107719191,LOC107574064,LOC107700061,LOC103039748)


Basic Information

Item Value
gene id npffr2a
gene name npffr2a,LOC107697256,LOC107755724,LOC107719191,LOC107574064,LOC107700061,LOC103039748
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 2784368 ~ 2798162 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243484.1
GGTGGTGATGTTTTCAGTGTCCCGCAGTCCggagctaaaaaaacaaaacaaaacaaaacacagcggACGTAGCTTTAAAGTAGCGCCCAGAGCACAATTGAACGCTGCGTCCGTCCCCACGCGCGCCGTGACGCTTAAAAGCGCAGCATCACTCTGCCGGTCTCAATTCTCagttctctctccctctctcgtGCCtgcgcattgttcactgacagtCCGCCGAAGAGTGTGGAAGTGACACCGGCAGCTTCGCTTCGCACGGGAAACTTGTTGAAACTGCAAATTATGACACGCGATATGCCGGAGTTCGcgttaaaagaaaatgaaattctATCGCAAATATTACTTCAGTTGTTACGCGTTTAAAAAGCTTTCCAAAGACTCCTTATGTCTCTCCGTGGAGGAACGGGCGAACAAGGAGTGTTCGTTTTTACCTGGGAACAGGTGGTACTGTAGGGAAACTGGGTGTGAAAAAAGatctaaaatgaacaaaacactgGATCTTAACATTACCCTTGAGGATGATGGAAACTGGACTTTTGTCAACGGTTCCAATGAATTCTTCTTACCTCAGAACAACATTACATACGTTGGATATTACCTGCATCAGCCATCTGTAGCAGCGGTCTTCATAGTGTCCTACCTGCTCATATTCCTGGTCTGCATGGTTGGAAATGGAGTGGTGTGTTTCATTGTGTTACGGAGCAAAAACATGCGCACCGTCACCAACCTTTTCATCCTCAACCTCGCCATCAGTGACCTTCTTGTTGGGATTTTCTGCATGCCCACAACTCTTCTTGACAACATCATTACAGGTTGGCCGTTTGGAAGCATGGTCTGCAAAATGAGTGGAATGGTCCAGGGCATATCAGTCTCAGCCTCCGTTTTCACCTTGGTTGCCATTGCAGTTGACAGATTCAGATGTATCGTGTATCCCTTCAAGCAAAAACTGACAATATCAACAGCCACCCTTATCATTATGATAATTTGGGTCCTGGCAGTGTCCATCATGTGTCCCTCTGGCGTCATGCTTCAGGTGACTAAAGAGCAAAGCGTCCGTGTGTTTCTGGGAGATGGCAACCGGACAAGCCCTTTCTACTGGTGCAGGGAAAACTGGCCTAACCAAGAGATGAGGAAGATCTACACCACCGTCCTCTTTGCCAACATTTACCTGGCTCCTCTATCCCTCATAGTGATTATGTACGCAAGGATCGGAATCACTCTGTTCAAAACGGCCATGCCGGCAGGCGCCAAACCGGGTCATGATAACCGCCACTCTGTGtcgaagaaaaaacaaagagtGATCAAAATGCTCCTCATCGTGGCCTTGCTCTTCATCCTGTCCTGGCTGCCTCTGTGGACGCTGATGATGCTAACAGACTATGTCAAACTTACGGAAGATCAGTACAAGCTTATTAACATCTACATTTACCCTTTTGCCCACTGGTTAGCCTTTTTCAACAGCAGCGTCAACCCGATAATCTACGGGTTCTTCAATGAGAACTTCCGGCGTGGATTTCAGGCCGTGTTTAAGTTCGGCCTGTGTCCTGTCGGTGGTCAACACCGGACATATTCTCACAGGGTGCAGGGCAATTCTGTGCAACCGGTGAACCCGCAACCCTCCACAGAGCCCATCTCGCTTAACAGCCTGGAGAACAACAGCTCGAGGAGGATGAACCATGTCAACGAGCAAGACTTGGTGATGGAAGATCTCGAAAAAGTGTCTGAATGCAGCGTGGAAGGAGCTTCTCTTTAGGGTGCCCaatagagagaggaagagaatgaTAGCAGGCTCATTACATCTCAAATGACAGACTATTATTTacttacaatttttaaatgacattaacaTTGTGTataaaatggattttatttattttgagtagTTTTTGCTACTAGCATGAATGTATTTACTGATGTTGTCAGATACAATTGGGCACATCTGGCAGTTCATCAGCTGTATTCTTGTACACTTCACAATCAAATTCAGTTTAAACACTGTaacattattgtaaaatgaTGTATATACATAGAATCATTATGTGAATTTGCTACTGTATAGTGATGTAAGCATCTGGGGTTTTACagtacatcattttatttattgatttatttttatatgcacaTGAAAGTATTAGAACTGCCATAATTCAGAGTCATTAATTGTTTCTGGATTACAGTGTGAGATTTTAGGTACAGCACTTGCAtcttaatactaatattaaaccTTCATACCTCTTCTGTGACAGATCCCTCAAAGTGCTAGAATAAATTTTAGTGGGAGGGTTTTATGGACCATTTTTTGTTAACTGGTGCCAAAACAGGGTAAAATGAGCCACGATAGAGATTAATCTGATTGTTTGCTGTTGGCACAATAAGCAGAAAGTAATAGTCATAGTAAGTCACACATGCCTTTCTGCCCTGACTGATAGTTGTATGGGCAACAAGAATATTTGAAGCACATGAGTCTGGATGTAGCACTGTGACTGACTTGCCTCAAGTTTGTTTTTAACCTCTCTTTTTGCATGTTAAATAGTTTCCTGCCATGTCGTTTCTAACTACTCCTTTTTTAAGCCTGTATTATCCTGTAACAGTTTTGCAAAACACGAACTGTTGTCATAAAACTGCAGTGATTTTAAAGTTAGACCCCAGCTCTCTGTTGTGATCCTTCAGGGGAGACAGCGCAAGGTTTGGAAATGATTGTCTGTcttattatgtattttactcACCGTGTTTCAGCTGAACGTACTTTGATGTATTCATCTGTCTGACATCAGAAAGTTCCATTTTACCTTTTTGATAAgtgttaaatttaataaatgttaaataaatctttttaaactGTGAAGGAAGTTCTGAAAGCAAGCTTTAGTGAGGCTCACTGTTTCTGTATATTTACAGACATATTGTAGTTTGgtaaagaatcattttttcagtttctttcttaGTTTCACCCTGAATTAATGAATGTCCCGCAGTCATTGTGAATGTCAGCAAAAGTCTTTTCTGTCTCTCAAATAGAGCAAATCATTTCCATTTACCAGActattttcattcaaatgtgACAGGACTTTGCTGGACTACTTATTTCAACCATTGAAGATTTTCCAAAACACCATCACGCAGAGGATTTATCCTCAAGTAATTTTAGCATCTGTTGTCTGCCGTAGATTGAATCTATCAGCAGTCAGAGCTGTGGTTTTGTCATTATCATAGCAGATGGGAGAAGAGTATGTGAATTCTGCCCTGTTCTTGATAGGAGACACTACACAAACCAATGCAATGTCAACATGATTAAGGCAGCAGCACCACTGTAAAGTGATATCGAAAATTAACTATGAGAAAGTGTGTTAGAAAGACAAGACGTTACGGGAAAACAACCTGTGATTACAAGGTGATTGTGACTCTCCAGATGTGTCACTTGTTATTGCAGGATCTGCCAAGGACACATCTCCCTGTTAATGAACATAAACTTGCTCTTTATGAAAAACAGAGTATTTATCGTGGATTTgttcatttctgtatttctaaTGATGTACTGGCAAAAGCAATGGTGTACACTTTGTGAATCTTGTTATATTGGTGTTGGCTACATGCTAATATTGAGTACAGTTGTTTCAAAAAGTGATTGTGAACGACTCATTCTGATTTTATAAACACCTTGCAACAAAGCAATCTGTGTTCAGGGttaacttttcttttcaaactgACTACATATCGATTAAAATAGtctatgaaaactaaaaaagtgcTGTTTATATTGTAAAGATACTATCATGCTTTGGTGTAGATTGATAAAGCAGtgtaaatagctttttttaaatttagatttatttttttggttaatttcACATAGCTCCACCAGACACGGCTTTAAAGGACCCTCATTGGTGCATCAtgggaaaaaactgaaatgtcttTTTGGATTGGAGTTGCTGGCGCTCCCCTTCAGAGATCACCGATTCTGTCACCGTTTCCTTTtcctgaatggaaaaaaaatgatgcaactCATTCTTTATAGGTGCAAGATACCTCCACGATCCTCCAGACTTTATATGTCTTAAAGTATACAGCGTTACAACGAAAAGCGAAATTTGTCTGATCAAACTGCCAAGTGATTTGTCACAGTTCTATTCACACTGAACTTTCTGCTGTCTTTTCTGCTGTAACCAATGAGGAAGCAGAGATATTCTTTTGGTAATGTAATCAGGCATTGCCTGGCCCCGGGGCCTGGCTCCAGCAGTGCCTCTGACGGTGCTGGAAATAGGACAATTCTGGCAATGATTCAACCTGCTGTGATTTCAGTCTTCGATGAATGCACAGTACTGGTGAAAATCTAGTGGCGTTCACGAGTATGTTCtgaataatgagataaaactgtcacaaaaaataaaaaccacaaagTATGAAGAGGGGGGTTGGTTTATTCAGGTCAGTGCTTGAGAAATGACTCATCTTACTTACAATTTTAATGTGATGTGTTAGTGATGTAGACGTGATGTGGTCAATGAGTGCCACTGAGGCAAGACATTTGTCATGATGACTGAACTTAATAGCATGtgtaaacattttcatcatGTGCTAGAcgataaaaaaacatgttggcCGAAATGATGGCGCTGTTGAAACAGACATCAGTCATACAGACATGTTATTGTGAAAAGTGAGGAAactgaataaatcaaaatgagtgtacttatattgttatatttgtttcCGGTGACCATTGTCATTTGTTATCCAAGGCTTTGAGTCCAAGGCTTTCAGAatgatgtaatataaaaatcatgTGCTCAGGGTAATAAATCGACGTGAAAGGGCTTGAA

Function

symbol description
npffr2a Predicted to enable neuropeptide receptor activity and opioid receptor binding activity. Predicted to act upstream of or within several processes, including regulation of MAPK cascade; regulation of adenylate cyclase activity; and regulation of cAMP-dependent protein kinase activity. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human NPFFR2 (neuropeptide FF receptor 2).

NR:

description
PREDICTED: neuropeptide FF receptor 2

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0045761 regulation of adenylate cyclase activity biological_process
GO:2000479 regulation of cAMP-dependent protein kinase activity biological_process
GO:0043408 regulation of MAPK cascade biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008188 neuropeptide receptor activity molecular_function
GO:0031628 opioid receptor binding molecular_function

KEGG:

id description
K08375 NPFFR2; neuropeptide FF receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243484.1 True 4826 mRNA 0.41 4 2784368 2798162

Neighbor

gene id symbol gene type direction distance location
fbp1a fbp1a,f16p1,LOC107557613,LOC107700071,LOC108426201,LOC103033769,LOC107727435 coding downstream 274335 2505569 ~ 2510033 (-)
fbp2 LOC107557612,LOC107755732,LOC107680540,LOC107727448,LOC107700070,LOC107558028 coding downstream 279788 2498938 ~ 2504580 (-)
gas1a gas1a,LOC107680573,LOC107755728,LOC107557610,LOC107727450,LOC107558025,LOC107700065 coding downstream 437586 2344884 ~ 2346782 (-)
LOC122349155 tars,LOC107755726,LOC107680583,LOC107700064,LOC107727452,LOC108255896 coding downstream 577268 2195998 ~ 2207100 (-)
LOC122348911 LOC107707953,LOC107707085 coding downstream 747902 2020260 ~ 2036466 (-)
slc4a4a slc4a4,LOC107755741,LOC107700079,LOC107747688,LOC107685251 coding upstream 33664 2831826 ~ 2881239 (-)
ifngr2 NA coding upstream 87097 2885259 ~ 2888147 (-)
poc5 poc5,LOC107755745,LOC107747692,LOC107565674 coding upstream 105267 2903429 ~ 2911287 (-)
f2rl2 LOC107685249,LOC107561621 coding upstream 165503 2963665 ~ 2966561 (-)
ssbp2a si:ch211-130m23.3,LOC107685246,LOC107561624,LOC107565675,LOC107700062,LOC107755749,LOC107748468 coding upstream 185258 2983420 ~ 3010867 (-)
G49456 NA non-coding downstream 229999 2550440 ~ 2554369 (-)
G49457 NA non-coding downstream 235178 2548564 ~ 2549190 (-)
G49455 LOC107755731,LOC107680527,LOC107557614,LOC107727443,LOC107700068,LOC107558030 non-coding downstream 239135 2542600 ~ 2545233 (-)
G49453 NA non-coding downstream 250725 2533222 ~ 2533643 (-)
G49450 NA non-coding downstream 261499 2511556 ~ 2522869 (-)
G49550 NA non-coding upstream 14456 2812618 ~ 2813121 (-)
G49551 gc,LOC107697255,LOC107700078,LOC107565678,LOC107747690 non-coding upstream 15219 2813381 ~ 2817960 (-)
G49552 NA non-coding upstream 23020 2821182 ~ 2828947 (-)
G49556 NA non-coding upstream 86538 2884700 ~ 2885127 (-)
G49591 NA non-coding upstream 179060 2977222 ~ 2977826 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other downstream 877206 1901590 ~ 1907162 (-)
G49309 LOC107658783,LOC107708003 other downstream 885542 1898083 ~ 1898826 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 1563475 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 1738051 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 1895410 880586 ~ 888958 (-)
chst10 chst10 other upstream 640587 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 1468106 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 1486247 4284409 ~ 4284499 (-)
LOC122349098 NA other upstream 1554899 4353061 ~ 4360979 (-)
G50107 NA other upstream 1734884 4533046 ~ 4574002 (-)

Expression


Co-expression Network