LOC122348751 (sh2b3,LOC107594562,LOC107550292)


Basic Information

Item Value
gene id LOC122348751
gene name sh2b3,LOC107594562,LOC107550292
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 8263 ~ 15074 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244591.1
GAAGATATGTTCTTTTCCTTTGCGTTTTAGGACAACAAAACGCCAAAGCTCACCGTACCCTGTTCGGACATCCAAGAGATTCGACGCTGTAATCGCCTAGAGATGCCAGACAACATGAACACATTTGTCTTAAAGgttACTGGTCATTCGGGTAGTTTTATATTTGAGGCTGATAATGAGCAGCAGGTGAGCTCTTGGACCACCGAGCTCAGAGAATGCATCACAAGCAGGTCAGATAGTGTGGATGGAGAAGCGTTTCCTGTTAGTGACTCGCTCAACGCAGCTCGCAGAGGGAGCACGGAGCCCAGCAGCCAGGgCTCTCTAGGTTTTGGACTAACAGAGCATGCCTACAATAAAACGGATCACTTCCTGTCCTCTTACCCATGGTTCCATGGGCCCATATCACGTGTGCGGGCTGCCTACCTTGTACAGCATGCTGGGCTCAGCGGCCATGGGAACTTCCTCGTGAGACAGAGCGAGACGCGGAGGGGAGACTACGTCCTCACGTTTAACTACCAGGGCAGAGCAAAGCATTTGCGTCTATCTTTAACTGAATGGGGTCAGTGTCGTGTGCAGCACCTGCGTTTCCCATCAGTCATGGACATGCTGAGTCACTTCCGCAACTGTCCGATCCCGCTGGAGTGCGGCGCCGCATGCGAAGTTATGCTGGCCAATTACGTGCGGGTAAACCCCACTCACACAGGTCAGAGTTCGGCCGTCGGCTCTCCGGTATTGGTGCCCTTCTCTCGCTGGAGCTCAGAGCCGAGTCTGGCTCACTGCAGTCCGGATTCGTGTCCTCACTCCAGCCCCTTCACGGCCCAGTCGTCCGGATTATCCGTGCTCCCGCATCGCACGGGCGCTTCGTTTCCAGACCGCCCCGTTCCCGTCCCCCTGCGCCGGAGCGAGTCGGTGGGCCGCAGAAACCTGCTCCGCCACCCCAACCCGCTGCCGCCCCTACTGGCCAACCGGGACTCTGACTACGAACTGGAGCCGCCCGACAGGGGGCGCAAGAGAGCCATCGACAACCAGTACATGTTCTTCTGACAGAGACAGAGGAGGAAAAAGAAGAGAACAAGCCGCGGATGAAAAGTGCTCCGGAATTCCCGGTCGGATGGAGAGCGTCTGGCAACCAAACGGAAGAAAGGAGTTGGAGTCGTGCAAGATTGCGCACGAGACTCGGGGCAGAGGCACCTGTGCGCTAACAATACCGCCGTACACCGGACACCCAGCCCTGGCAGCTGTCTACCTTGTGAATGTATTATACGGATGTTTCGCTATCAAATCAGTGTGTATCGTAAAATAGCTCGGAGGAGTTGTTGGATGGGAACGTTGCGAGACGGCTGGTCAGCAAGCCGAACACAAACCAAGGGTCCATTCACATTCAAACACTTTCGTGTCTACACTGGAAGCGGACATCGCAACAGCTCGAGGCCGTCTACACTGGATACATTCATTCAGCTGTATGCTAGAGGCTAGACTGTAGTAATCGACGATTACTAAAACGACGATAACATTTGTTTGTcgatcagacaaaaaaaatcgtTATATTCGacagaaatgcattacaaaatagATTTTGCATGCGATTTAGTTTGATCTACAACTACAACTGCATATGCTTATAgtagaaatgacaaaatgattCAAGTTAGCTCATCAGACCAGGAGGCTAGAATTTAGCGATTATTAAAATCGTGTCAAAATCATTCGAAGTAATCTTTATTTTCCACAGCAATcctttataaaattaatttagcatgCGATTAACTTTAGCATTAATTTTGCATATGTTCATATCCCTACAACTGCATATGCGTATTGTTAAGggaaaaaataagacaaattaGTTCGCCAGACCAGGAGGCGAAAGCGTGATAGATTGGAAAAATCATCAGaatttacaattacaaaattgATTTTGCATGtgatcattttataattatgttttattattagtactCCTACGACTGCATACGCATATGGTTAGAA

Function

symbol description
sh2b3 Predicted to enable transmembrane receptor protein tyrosine kinase adaptor activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within hemopoiesis and signal transduction. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in essential thrombocythemia; familial erythrocytosis 1; and myelofibrosis. Orthologous to human SH2B3 (SH2B adaptor protein 3).

NR:

description
PREDICTED: SH2B adapter protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244591.1 True 1989 mRNA 0.49 6 8263 15074

Neighbor

gene id symbol gene type direction distance location
LOC122349836 NA coding upstream 8530 23604 ~ 23703 (-)
trnan-guu_33 NA coding upstream 265708 280782 ~ 280855 (-)
tifa tifab,LOC107742334,LOC107692005,LOC107659708,LOC107753989,LOC107588127 coding upstream 268259 283333 ~ 285000 (-)
tnfsf10l LOC107691962,LOC107562848,LOC107742295,LOC107701536,LOC107753950,LOC108410411,LOC103041464 coding upstream 324751 339825 ~ 358332 (-)
si:dkey-171c9.3 LOC107692004,LOC107742319 coding upstream 346949 362023 ~ 367395 (-)
LOC122349555 LOC107704198,LOC107750288,LOC107658248,LOC107567655 non-coding downstream 4196 1991 ~ 4067 (-)
LOC122349723 rictora,LOC107658248,LOC107725140,LOC107704198 non-coding downstream 6399 1457 ~ 1864 (-)
G48720 NA non-coding upstream 41331 56405 ~ 64136 (-)
G48733 NA non-coding upstream 72476 87550 ~ 89420 (-)
G48736 NA non-coding upstream 105945 121019 ~ 121395 (-)
G48741 NA non-coding upstream 154925 169999 ~ 170927 (-)
G48743 NA non-coding upstream 157220 172294 ~ 173013 (-)
si:dkey-112a7.4 si:dkey-112a7.4 other upstream 196267 211341 ~ 213685 (-)
G48823 LOC107667730 other upstream 255295 270369 ~ 274498 (-)
LOC122348397 zgc:92429,LOC107588137,LOC107753943,LOC107668941,LOC103044742,LOC108434854,LOC108267498 other upstream 804563 819637 ~ 829670 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other upstream 865512 880586 ~ 888958 (-)
zgc:153151 NA other upstream 1025848 1040922 ~ 1046317 (-)

Expression


Co-expression Network