LOC122349140


Basic Information

Item Value
gene id LOC122349140
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 2010868 ~ 2017348 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245087.1
CTCCATTCGCTGTAGAAACATCAGCTTGAGCTCTGAGAGgatttctgtctcttctctgGTGAATGTAAATCATGGAAAGACTGGTGACGTTCCTCCTCACTGGATCTCTGATACAAGgtgttttttgTGAGTTCAGTATCAATCTGCCAAAGAAAGTAGAAGCTCTACAAGGATCCTGTGTTTTCATTCCCTGCACATTTGATGTtgataaaaaacatgaaaatgatcTCACAGATAAAGCAAAGAGAATATGGTATAAAGGAAACCCTTACTCTGTAGTGTTTGACTCCAGCAGACCTAACACTAAACTGTTCAAAGGAGAAATATTAGGCACTGCTACACAGAAAAACTGCAGCACACGCTTCGATAATGTCAATCAGAATCATAATGGATCATATTTCTTCAGACTTGAAGATGATAAACTGAGGTATAGCTTCATAAATAATCCACTCTTACAAATTGTCGTCTCAGGATCTCCACCCAAACCCACATTGAGTGTCTTTAAGGATCAGCAGGAGGTGATGAAGATGGAGGAGGTGATGGAGGAAAGTTCATTGAGTCTGCGCTGCTCTACTAAGATCTTCTGTCCGTCTCGTCCTCCATCTCTCACGTGGACCTCGTCTCTCAATGAGAACATCACAGGACAGCAGTATcagagccaatcagagctcgTCTCTGATCTGAACTTCACTGTTTCTCACCGTCTTCACAAAGTCACTTTCACCTGCACCGCAACACACCAGCTACAGAGGAATATAACAACACAGCGCTCCCGTATGATACGAGTTCAGTATGCTCCTACAAACACATCAGTGAGGATAAACCCAGCTGGTTTAGTTCTGGAGGGTCgttcagtgactctgatctgcagcagtgatgCAAACCCAGCAGTGAACTACACCTGGTACAGAGACCCTGAAGAACTCCTGAATCCAGTTCAGACCGGACCAAACCTGACCCTCAACAACCCTGACCCTACAGACAGAGGACTATACTACTGTAGAGCTGACAACAAACACGGATCTCAGAACACATCAGTGCTGCTGGACGTCCAGTTTGCGCCCAAAGTCAACAGCTCTTGTAGCAGAAACAGTGTAATGTCGTGTGTCTGTGAGGCTCATGGGAATCCCTGCCCTACACTAGAGTGGCGTCTGTCTGGACATGCGCTCACTAACTCTACAGAAACACCCATCAGTGAGGAGAAGTTAGGAAGCACAGGAGTGAAGAGCGTCCTGACCCTCCGTCAGTCCCTCTCAGACACAGACGTCCTGCAGTGTTTCAGCTCAAACGTTTACGGCAGCGCAAGTCAACAGTTTCAGCCCATCTCATCAACACAAGAGACCAGTCTCCACTTCCCATCAGCGCTGCTCGGAGCGGCTGTTAGTGCATCACTGATGATGATTCTGTGCATCGTCAAGCTCTACTCTGAACGgagaaggaaagaaaaacctTCAGAATCCAGGCAAGACGACACGTCTGGACTCATTCTGACTCAAATAGCCGTTGCTCTGGATCATGACATTCAGTTTGTTCACGCCGATAACGGCATGCTGTCATCCACCGCACCGAGTGAACCACAATCTCTTCATTATTCCTCCATCGATTTCTCAAACACTGAAGCGCCGTCAGGAGAGATCAGGGGCATGGCCTCGCTGACCAGTGAATACGCTACGATCAGACACCGTCCTGAAGAAGCTGCAGACCCAGAGAACACCACAGAGCCCAAACAAGAAGAAGACATGACAGCAGAGATCACAGACACTTCTTCACCGGCATCAGAAGACGTGATTTATGGAAacataatcaaatcaaaaacaaatattatctgattatgtaatccGTATGAAACCAAAGGGAGGTCGGCCGACTGTCTTTCCTGTACCTGAGCTCATTTTATGTAGTCACTACTTTTACAAATGCCCTTACctagatacaaaaaaatatataaataaagattaatctaatttttaaaatagtttttaaagaaGACCTGCTATGAGGAATAAGCTGAAAATTGACCTCGTGATTTTATACAGAATTTATATAacgatttatttattactaattgTGTAACGAATTTACTTTTCGGACAGAATaattagtaatttaaataaatattgattatataattagtaactaattaattactttttgaaagtaACCTACCCAACACTGATGCATCTTTGAGCTCCACAGAGCTTTTTAGAGCAACTTAGGGGGTTGTTCATCTAAAACTTACAATTATAAACCTACAGAACGTTTTTAACAGGACAGTTCATTCATGGCAGAAGTAGAAACGTCACTATTTTGTCTTCTTTTGGGTTGAAGTGACTGTCAGGCTTCGATGCCGCTCGAGCCACATGCTTCATGTTTCAGATGCTTCAGACTGATTTGGTGAACTGGGTCAAAAACTACATTCAAGAACCAGACATCACTCCAGACTGTATGAAGCATTACAggtaataaagttttaaataatgtgtatcTTGCGCACACCAAGcatttcacttcataagacctcAGAGAGATGCTTTTTGGTAATGATACCAATTgacttgcattttatgaatcaccTACATTTTGAGTGGTGAGTCCAGCCATGTTTTTGGTTCTCTGCatcatatttattaacattatgaTGGTCAGAAAACCAGAgctattttaaggtgttttcAGAACACGTTTGTGGGGAAAAGGGGCAAAATAGGTTAAATATTTGGTGAGAAGCGTACTTTCCCTTAATGTGTAGTTTGTGTCCCACGTTTATTTGTGAACACTGTCAACTTCTTCTGGGGTCACACTTTTAGGTCCAGTCACACTTCACCCCTTAACCCTACCTTTTCGTTTCATTCATGTGAAGGGTTAGGGCTGTCTCAATTCTCTTTTGGTCAGAGCTAGATAGCCCTTCACACGAAGATGTTATAGGACAAAGGGGCATGAGAATTATCAGCAAAAGTCTATAAGGTAGCCTATAGGACCTAGAGTATTtttgcacttatttattttctttatttattttttgtcattttggctTTATCTAGTGTTTCTGAAAAAGCAAGTCTACAgtcactaataataataattatttcatgATGAAGACTGATATTGCtatattctttaaatgtttCCATAAACATCTGTCCGGAAAAAGCTGGGAATGCTGTTTTtcgtttgtttgtgtttaaattaaCTCCTGTCAGGACATATGGTACACATATGGTGTTTTTCTGATATAGTAcataataacaatgataataatattgtgatgcattaattttgataaaataaagtcAACAGTAAATTAAATGGTGTCTAGTGATCATCTCTGGCTGAAGATAACTTACGGATACCTACTTTGAAGATCAG

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245087.1 True 3366 mRNA 0.41 9 2010868 2017348

Neighbor

gene id symbol gene type direction distance location
LOC122348468 LOC107707987,LOC107555888,LOC107707097,LOC107662203,LOC107658968,LOC107590514 coding downstream 89826 1907473 ~ 1921042 (-)
LOC122349772 nudt4b,LOC107555891,LOC107662198,LOC107708005,LOC107576967,LOC101067274,LOC103028168,LOC108275142,LOC108438514 coding downstream 120097 1883030 ~ 1890771 (-)
badb LOC107749804,LOC107750664,LOC107691899,LOC107562077,LOC107588192,LOC107669205 coding downstream 496289 1512152 ~ 1514579 (-)
LOC122349649 majin coding downstream 500958 1506202 ~ 1509910 (-)
gpha2 gpha2,LOC107749831,LOC107588222,LOC107668374 coding downstream 506831 1501239 ~ 1504037 (-)
LOC122348911 LOC107707953,LOC107707085 coding upstream 2912 2020260 ~ 2036466 (-)
LOC122349155 tars,LOC107755726,LOC107680583,LOC107700064,LOC107727452,LOC108255896 coding upstream 178650 2195998 ~ 2207100 (-)
gas1a gas1a,LOC107680573,LOC107755728,LOC107557610,LOC107727450,LOC107558025,LOC107700065 coding upstream 327536 2344884 ~ 2346782 (-)
fbp2 LOC107557612,LOC107755732,LOC107680540,LOC107727448,LOC107700070,LOC107558028 coding upstream 481590 2498938 ~ 2504580 (-)
fbp1a fbp1a,f16p1,LOC107557613,LOC107700071,LOC108426201,LOC103033769,LOC107727435 coding upstream 488221 2505569 ~ 2510033 (-)
G49322 LOC107590516,LOC107658754,LOC107662226,LOC105896753 non-coding downstream 949 1945761 ~ 2009919 (-)
G49243 NA non-coding downstream 308199 1701393 ~ 1702669 (-)
G49241 NA non-coding downstream 311232 1699306 ~ 1699636 (-)
G49239 NA non-coding downstream 312106 1698449 ~ 1698762 (-)
G49231 NA non-coding downstream 403785 1606871 ~ 1607083 (-)
G49332 NA non-coding upstream 14779 2032127 ~ 2034171 (-)
G49340 NA non-coding upstream 39835 2057183 ~ 2058617 (-)
G49351 NA non-coding upstream 111095 2128443 ~ 2128870 (-)
LOC122349156 NA non-coding upstream 175661 2193009 ~ 2195812 (-)
G49403 NA non-coding upstream 290733 2308081 ~ 2315571 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other downstream 103706 1901590 ~ 1907162 (-)
G49309 LOC107658783,LOC107708003 other downstream 112042 1898083 ~ 1898826 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 789975 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 964551 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 1121910 880586 ~ 888958 (-)
chst10 chst10 other upstream 1421401 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 2248920 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 2267061 4284409 ~ 4284499 (-)
LOC122349098 NA other upstream 2335713 4353061 ~ 4360979 (-)
G50107 NA other upstream 2515698 4533046 ~ 4574002 (-)

Expression


Co-expression Network