gas1a (gas1a,LOC107680573,LOC107755728,LOC107557610,LOC107727450,LOC107558025,LOC107700065)


Basic Information

Item Value
gene id gas1a
gene name gas1a,LOC107680573,LOC107755728,LOC107557610,LOC107727450,LOC107558025,LOC107700065
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 2344884 ~ 2346782 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245098.1
AATCCCTAAAACTTCCGCAGGAGTAGAATGGATAAAGCAAACTAGAGGGTCAGAAAGGGGCCAGTGTGTGAATTTGAATGCCGTGTTATTATCTGTTCGCGTCCCGATGCGTAGTTAATGACGGACGACAAGCGCACGTAGAATGTAGAAGTTTAGAAGTTGGGTCGGGAAAAGCGCGATGTTGGTGGCTCGCGAGCGCATTCGGATGTGAGCGAGAGACGCGAGAGGACGAGCTCGTGAGCTCCTCGCTTCTGCCCACAAGAAAGAGAAGAGGTGGAAGGAGGAATCACCGCACTGTCACACGGACGCGAACCGGGAAGATGGAATGAACAACCCGTTTGCTGGAAATAGCACTTCTCGTAATTCAGGCTTCTTTTTAAGAACATGGATTACAGGAAAATGTCTTTATAGATTCGCCGCAATCGTGGaacaaactttttcttttggATGGACCTTGCAAACATGATCTGAGCCGGGGGGATTTTTTCTTCCCTCACTAGATGCAatggaaatatgaaatatgcatgctTAAAACTGACCTGACGCCAGTCAAACGATTACAGTCTTCGATATGGCAACTCGTGCAGGTTTGGTTCGTGGCGCGCGCACGTTCATTTGGCCTTTCgcttgtgtgcttgtgtgttttagttgtttttccATCGCCTCATCCAACCACCACGGCCATCGGTTGATCTGCTGGCAAGCGATACTCAACTGCCAGTCGGAGCCAGACTGTCATTACGCTTATGACCAATATTTGCACGCCTGTGACTCGATACTGAGTGGCCAGAGGAAGAAATGTCCCAGTCACTGCATCTCGTCGCTGGTGCAACTCAACCTGACCAAAAGCGGCCCGGCGCTGGAGGACTGCAGCTGCGCCTCGGACCCCCGCTGCCGGGAGATCAAGCGAGCCATCGAGCCGTGTTTGCCCAAAACCAGCAGCATGGGTTGCACCGAAGCCCGGCGCCAGTGCGAGAGGGACATCCAGTGCCGAAGCGCCATGGGCGATTATTTACTCCACTGCGGGAAACTCTTCAGCGGCTCCAGCTGCTCGAACCCGTGCCGCAATGTCATCGCGTACATGCGCAAACTCCCCAAAGCTCAACTCCTGGATACTTGCGTCTGTGACGGCTCAGAGCGGACTATCTGCGAGTTCatcaaaaacagcatgaaaacGCTTTGCTTTGACTCTCCCCCCGTGGATGAAGAAGGCTCCAGCGGGTTGGACGATGATGAGCCCGATGATGATTATTACTCAGAACCAGAGCCCACGAGGAACACAGGTTCTGCTTTTGTGGCATGTTCTGTTTTGACTGTGGTGGCATCCATTTTGGCTCTAGTGCCGCTTCCTTGATCACTTTGAAGTCGAGTTAATGATCCGCTCCAACGGCTGTTCGGGAATAgtgcattttgtcattttttctcctgttttccAGTTCGTTTATGGCATGCTGTTTGCACATTTGTTCCTTAAAACGagctagtttttatttttatgcgtAGCAAGCAATCCAATAGTGActatcattttcacattttatgaaGTGTTCATTAGGTGCTACTACTGCTTTTTTAGGATACTAGTGGCTTTGCCAGTAGTCAGTAGTATCTATCCCACTTTTTCCTCtagcagacttttttttaaatctcactaGTTGCTAATTACgtgagaaaaaatattaaatgacaaaaaaaaaaatacagaaagtttACCAGTATGTATGTTCAGTTGAAAAACCTGAATAGATTCTAATAACTTTGAATAGTTTGTGAACCACAGCTCCCCATAGAAATGAATGGCAAAAAAATAgacaatgtaatataaatgaattattcaccGGACTAATCTGGAATAGTGACTAATAGCAGAATTACAAGTAACTACaaatttctgaaaaa

Function

symbol description
gas1a Predicted to act upstream of or within regulation of cell cycle. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in brain; paraxial mesoderm; and somite. Orthologous to human GAS1 (growth arrest specific 1).

NR:

description
growth arrest-specific protein 1

GO: NA

KEGG:

id description
K06232 GAS1; growth arrest-specific 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245098.1 True 1899 mRNA 0.47 1 2344884 2346782

Neighbor

gene id symbol gene type direction distance location
LOC122349155 tars,LOC107755726,LOC107680583,LOC107700064,LOC107727452,LOC108255896 coding downstream 137784 2195998 ~ 2207100 (-)
LOC122348911 LOC107707953,LOC107707085 coding downstream 308418 2020260 ~ 2036466 (-)
LOC122349140 NA coding downstream 327536 2010868 ~ 2017348 (-)
LOC122348468 LOC107707987,LOC107555888,LOC107707097,LOC107662203,LOC107658968,LOC107590514 coding downstream 423842 1907473 ~ 1921042 (-)
LOC122349772 nudt4b,LOC107555891,LOC107662198,LOC107708005,LOC107576967,LOC101067274,LOC103028168,LOC108275142,LOC108438514 coding downstream 454113 1883030 ~ 1890771 (-)
fbp2 LOC107557612,LOC107755732,LOC107680540,LOC107727448,LOC107700070,LOC107558028 coding upstream 152156 2498938 ~ 2504580 (-)
fbp1a fbp1a,f16p1,LOC107557613,LOC107700071,LOC108426201,LOC103033769,LOC107727435 coding upstream 158787 2505569 ~ 2510033 (-)
npffr2a npffr2a,LOC107697256,LOC107755724,LOC107719191,LOC107574064,LOC107700061,LOC103039748 coding upstream 437586 2784368 ~ 2798162 (-)
slc4a4a slc4a4,LOC107755741,LOC107700079,LOC107747688,LOC107685251 coding upstream 485044 2831826 ~ 2881239 (-)
ifngr2 NA coding upstream 538477 2885259 ~ 2888147 (-)
G49403 NA non-coding downstream 29313 2308081 ~ 2315571 (-)
LOC122349156 NA non-coding downstream 149072 2193009 ~ 2195812 (-)
G49351 NA non-coding downstream 216014 2128443 ~ 2128870 (-)
G49340 NA non-coding downstream 286267 2057183 ~ 2058617 (-)
G49332 NA non-coding downstream 310713 2032127 ~ 2034171 (-)
G49422 NA non-coding upstream 73 2346855 ~ 2347199 (-)
G49423 NA non-coding upstream 18025 2364807 ~ 2365090 (-)
G49424 NA non-coding upstream 19611 2366393 ~ 2466286 (-)
LOC122349160 NA non-coding upstream 64889 2411671 ~ 2465062 (-)
G49444 NA non-coding upstream 137762 2484544 ~ 2485199 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other downstream 437722 1901590 ~ 1907162 (-)
G49309 LOC107658783,LOC107708003 other downstream 446058 1898083 ~ 1898826 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 1123991 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 1298567 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 1455926 880586 ~ 888958 (-)
chst10 chst10 other upstream 1091967 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 1919486 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 1937627 4284409 ~ 4284499 (-)
LOC122349098 NA other upstream 2006279 4353061 ~ 4360979 (-)
G50107 NA other upstream 2186264 4533046 ~ 4574002 (-)

Expression


Co-expression Network