LOC122349395 (LOC107691994,LOC107749836,LOC107575807,LOC107741479,LOC107563369)


Basic Information

Item Value
gene id LOC122349395
gene name LOC107691994,LOC107749836,LOC107575807,LOC107741479,LOC107563369
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 1366838 ~ 1373896 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245420.1
ACCTGGGTTGTACAGCCATCAAACCCATCAGTTTCACTACTTCTCCAAACCATGGAAGTCCTAAATTTAGGAAGCCTGCTGTACTAGATCATGTCACATATGAGCTGAGTGAACTTAAAATAATTCTTCGCTGTATGCCCTACATTACAGAACTGAGGTTCAGTGCTGTTCTCAGACAGCCCAAAGACCTCCACAAAATTGTAAAGGTTGTTGCTGATCTTTTCATTCTTGCATCTGAAAGTGGAGGGGGACAACTAAGAAGCCTTTCTACTGCATGCAGTTACTCAAACTTCCCTTTTGCTGAAGACCGCAAAGACATGCAGAGCTTGTTCCTTATGGATCTCTTCACTCAATTGAAGGACGGTTCATCTAAGACAGCAATAGCATCATTGAAGCCCATTCTTCAGGTTGCCCCTGCTATATGGACATTAGACCTACAAAAACAAGAGAAGACTTTTGCTCTTACCGAATTACTGAAGCTTCAGGCAGTCACAAAAACTGTAGAGCTTACAAGCTGGTCATGTGAAAGGGAAATATTTAGGAGTTTCCTGAATTGTTTACCCTATATTTCATGCCTTTGCTGTAATGAGCAGTTTTTCCAGTCTGTGTGTGAAGTCCTTTCAGCAGACAGCAAATGGAATCCAAAGCAGATTGCTGAGCTTTTAAGATCCCTTGGTTTTAGCATTTCATTGACAGCCTTGCTGCCAAGTCGCCTTTGCGAAGCTGTTGGCAGTGTTTTTAAACTGCTGGACAAAGAGGAAGACATCTCCCTGAGACTTCTTCCTCAAAGGATCTCTTGTCAAGGTTGTGCCTACCTCTTTTCAAATTTGAAAAAGCTTCAAACATTGAGagtAAATGAAAAAGCAACTGCAAAGCTGGCAAGACTAGTTATATCCAATAAAGAAAAGAATGCTGTAACTGTGGAAGAGCTGTCTTTGGTTTTAGCTAACTCTCATCTACCAGAGAGAGCACTTTGCCGGCTATTAAGCAACCTTACTTCTCTTCTTAGAGTCTGGAGAGTTCACAACTTGAACCTTTCAGAATTTAAAATTGAGCCTCACTGGCTTGTTTGTCTGCTGTGTCATCAGGGTCCCTTGTCCATTAAATTTCATGAAGGGACTCTGCAACAACTGGCGGAAATTGTGTATGATGCTCAAGATGAAAATTTGACACAGTTGTTTCTGGAGAAAATTGATGGTGATTTATCACCTTGTAATTTGTCCTGGGAAGTCTTATCTTACCTAATTCAGGGCACTAAAAAGCAAGTGACACTGAACCTTGCAGAGGGTAGGTTTAGTGTCTTGAAAGTTCCAAACCTTCTTGCTGTACTGGACACAGTGTGCTTTAAAAGGATAAGCCCACGGTTTGTCAGAGCTGCACTGAAAGAGATATACCAAAACCATGCAGGTCATCTGATTGTGAAATTAGTTAAATCTTCAGGTAACCTGATTAACCTTTGCATGAGAGAGTTGGATTCAACTGACTGCAGAGCCCTCTGTTTTGCCCTGCACTATAGTGATGATGTTAAGCTCAACCTGTTGAACTCTGTCATACCAAATAATGAGACGGACAGCATCGTCAAACTTCTGCACAGAGTATCTGATCTGAGGGTTGATAGAAAGCTGTTGTTGAACTTTCTTCAAGTGTCTAAGGACATGGAAAAACAAGGATATTCAATGTCTTCCCTTTTGGCTTCACTGAACCACAAACTGGACTTCTCCTTTAATTCTTCCCTGGGCAGTGGTCGTTCTGGTCAAGAGAATAGGGATCTTCTAACTATGAGTCGTATGGATTTTATAGCCATTTCTTCTGCCATTAAAACATCAACGTGTGACACAGAATTGATTTTATACGACTGCCAAGCAGATGATTCTGCACTTGAGATTTTATTCCCCATTCTGCACAAAGTGAATCTTCACTTGGGCAGAAGTCTTCTTTGTCAGGTTTTAACCTTGATTTCCAATGCCTCAATGGCCATGTCTTTGCATTGGGCCTCATCACTTTCCAAAGCTCTTGGAAAAGAACTGAACCTCAGTTACATTCCTCTTAACTATCGTACATGTGAGTCTCTGCAGTTAGTCCTGGATGACAAAGAGGAGCTTACACATCTTAATCTTAGCTATTGTCAGATCACAGATGCTTGCTTGGATCTTTTGCTCCCTCACCTCcacaaaattatgattttagatctTACTGGAAATGACATAACTGATAAAGGTGTGCTGAGACTGCACCAAGCCTTAGATGAAAACAGTTTCACAAAGACCATATGTCTTTGTGACAACCAAATAACAGAAATGGGCCTTCTGGTGGAAGCACGCTTTAAAACCCAACAGACCGACACAAGAAGATGCATCCAAACACAGAATTACACCACAAAAGATCTCAGGTCAAAAAGTGAGATGGAAAAATCAAGCAGTACTTTTGTAAAGACAGAAGATCTCATAAAGAAGTTTGAACCTGAACTAACCGTAAACAATGGCAAGATTTCCTACAGGTTTCAGTGGAAAACAGAAGGCCTTTTCATGTGCAGCGCAACGAGGCTAGTGTTCGGATTAAAAGGAAGTGGCTGTGTAGAGTACAGTGTGGCTCACTGGGATATGCATCTCCTCATCAACACTCACCGTGAGCCTGCTGGGCCTCTGTTCGATATCAAAACCCCTACAGGAGAAATCTACGAGCTTCACCTTCCACACTCCGAGACACACGttgatGCCATTGGAAGTCTTTCTGTTTTCCATATACACAATGAAGACACTTGGGAATTCCTCTCTCCAAATAAAATTTCAAGAACGCATATAGCTGTAAATGTTTGCAGGTTATCTAGGTATGGCATTGTGTGTGAgaatcaaaataacaaaatcagTGGCCAGGTGTTGCTATTCCAGGAACCGGACATGTCACAGACACAGCAAAGGCTGTGGGTTTTTCTTTTGCCAAGCAATGTCCCACTCTCCGAGATTAAAGAACAGCAACAACAGTATGTGTTCATCCAAACCAGCTCTGACTGCAAACTAGAGAGAAATGCAAAGTACACTCTGATCTCAAAAAAAGCCAAAAGAGTCCAACCGAAGgaaaaaatatttgaacccTTGCATGCCGGCAATCATCATCCTGCATTTGAAGTCTTCTTAGATAAAGATGTGACTGAATTGCGAATTAAAATTcagcttaaaataaaagaaagtgaTAAGATTAACTTCAAAAATGCATGGAAGCGTTGGATAGTACTCAAGAAAAACACagATAATAGTGCACAAATGAGAACTGAAGAACATTCTAACATTCAagTAAACTCTAAAACCTGGATATCTGCTCTTTCTGAAATCATGGAGGATCTTAAAAGTGAGGAGTTCAAGAAACTAAAGCATTTAATGGCTCACACTGAGAAAAGACATCCAATTTGTTCAATGAAACTTGAAGAAACAAAAGACCGGTGTGAGTTGGTGACTTTGGTTTTTAAGTCATGGGGATTCAGAGAATCGGTGAAAGCCATACGTGACTTTATGAAGAAGCTGCCTCGTAATGATGAATTTGTTACAGACAAATTAAAGCCATATGTGACGATGTTTGGTCTTGAGGGTTAGAGCATATCAGCGCACCACTTCCTGCCACTGAGGACGTCCAGAGGAAACGCTGTCTATGTAGATCTTGCAGCATTTTTAAGGACTACTTTCACCCTGACTGTTTAATCTTCTGCCCTCTGGGAGGTGCTTCGAGAGCCTAAATGCTGTGATCTGTAAATTATGTCCATAATACAGTCTTATCTGTATATTCATTgtacatttgtaacattttgaaGACACAGTATATCCTGCACTTACTGTTTATTGCACTTCTGGTTTGATGCTAACAGTCTTTTGTTGCCTTATACCTTGTGCAATGACAATGAAGTTAAATCTAATCTATTGTCACAGACTTTTCagtgtaaaaacacttttattaacAACCGATTACCACAGTGTGACAACCTTGATTGTACTTCAACTGTAAATTCTCGCATggttttgtaattaatttttttttaaaaatgtatttaatgtatgtatttagctgttgaaaatgaaagagacagaaataTGAGAAGTGCTGCAGTTATGTGTGCTGTAATGATGACCATGAgctgtttctattttttgttcatatattatgtccaaatatttgagaaatataTACTTTGTTGATAAAAGCAGAATCAATTGaataaaaagtgcaataaatgtttgatttaaaaaaagca

Function

NR:

description
PREDICTED: uncharacterized protein LOC107691994

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245420.1 True 4240 mRNA 0.40 17 1366838 1373896

Neighbor

gene id symbol gene type direction distance location
fam113 LOC107741458,LOC107691916 coding downstream 523 1363255 ~ 1366315 (-)
otub1b otub1b,LOC107588177,LOC107668564,LOC107691913,LOC107562237 coding downstream 4973 1357913 ~ 1361865 (-)
cmtr2 cmtr2,LOC107588175,LOC107691918,LOC107749817 coding downstream 51688 1310276 ~ 1315150 (-)
calb2b calb2b,LOC107563379,LOC107691995,LOC107668624,LOC107749837,LOC107741475 coding downstream 61186 1297148 ~ 1305652 (-)
rgp1 rgp1,LOC107741481,LOC107588171,LOC107691996,LOC107749838,LOC107668635,LOC107563390 coding downstream 84595 1277210 ~ 1282243 (-)
LOC122349396 LOC107563097,LOC107741473 coding upstream 583 1374479 ~ 1380091 (-)
adad2 LOC107588220,LOC107749835,LOC107668536 coding upstream 8239 1382135 ~ 1386182 (-)
rcor2 rcor2,LOC107691911,LOC107750597,LOC107588183,LOC107562174,LOC107668449,LOC107749809 coding upstream 65218 1439114 ~ 1447857 (-)
arl2 arl2,LOC107588185,LOC107668402,LOC107749806 coding upstream 99461 1473357 ~ 1475372 (-)
gpha2 gpha2,LOC107749831,LOC107588222,LOC107668374 coding upstream 127343 1501239 ~ 1504037 (-)
G49023 NA non-coding downstream 287646 1078963 ~ 1079192 (-)
G49011 NA non-coding downstream 370339 996084 ~ 996499 (-)
G49004 NA non-coding downstream 384076 982339 ~ 982762 (-)
G48985 NA non-coding downstream 419676 946464 ~ 947162 (-)
G48936 syt4,LOC107562593,LOC107742284,LOC107691948,LOC107588142,LOC107668880,LOC107753936 non-coding downstream 462938 899143 ~ 903900 (-)
G49186 LOC107691905,LOC107562132,LOC107750593,LOC107668381,LOC107588184 non-coding upstream 91293 1465189 ~ 1468013 (-)
G49210 NA non-coding upstream 123427 1497323 ~ 1517408 (-)
G49231 NA non-coding upstream 232975 1606871 ~ 1607083 (-)
G49239 NA non-coding upstream 324553 1698449 ~ 1698762 (-)
G49241 NA non-coding upstream 325410 1699306 ~ 1699636 (-)
G49133 LOC107691997,LOC107741482,LOC107563408,LOC107668708,LOC107588219 other downstream 145945 1169981 ~ 1220893 (-)
zgc:153151 NA other downstream 320521 1040922 ~ 1046317 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other downstream 477880 880586 ~ 888958 (-)
LOC122348397 zgc:92429,LOC107588137,LOC107753943,LOC107668941,LOC103044742,LOC108434854,LOC108267498 other downstream 537168 819637 ~ 829670 (-)
G48823 LOC107667730 other downstream 1092340 270369 ~ 274498 (-)
G49309 LOC107658783,LOC107708003 other upstream 524187 1898083 ~ 1898826 (-)
LOC122348471 pwp1,LOC107658969,LOC105905702 other upstream 527694 1901590 ~ 1907162 (-)
chst10 chst10 other upstream 2064853 3438749 ~ 3465586 (-)
LOC122348141 NA other upstream 2892372 4266268 ~ 4268884 (-)
trnar-ucu_8 NA other upstream 2910513 4284409 ~ 4284499 (-)

Expression


Co-expression Network