G29610


Basic Information

Item Value
gene id G29610
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7834816 ~ 7836818 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU33517
TACAATATTGCGTTACTTTTTATGTAAAGGATTGCGATACTTTTGTGTTACTTTTACTCATCTGGGCTGGGCTTGCTTGTTTGTTTTTAATAACAAAAAATATATATTTTTGGCAAATGTAAAGGCCCTTTCACACCAAAGTGAAACGAAGCCTCAGGCTGAAAGAAATGCAAATTCACACCTGTACAGTAGAGGGCGCAGCTCAAACAAACCTTTCAGCTGTGCTGCCATTCTGGATTGCAGAAGAACAGGATGCAGGAGAAGAAAGTTCAACATTCTTACTTAAGTAATAAAAACAAAAGAATGAAACACAAATGTGATTTTTATCTAGAGTCATTTTTGCTTATTAGTATGGTTGAACTGGTTCATAGAAGTTCAGCAGCAAAGACATTGGTTAATATATTGAGATTAAATACATAAAATATATTTGTGTTATTCAACATTTAATTATTGTGGGTTTGTGTAATATTCAGAGTTTACATTTAACTGTTTTTATTGATTTTGAGGAATACTGAATCTGTTTTTGTGCAAGTGAGATGAGTAAAATGCATGCTCACATTTAGTCTAGACTATAATCATCATGATTACACAGCGCCTCTGCATCTTATTCGCAATTTCTCTCAACATGGGGACAGGAGAGCTGTCAGTTAATAAATGCGAAAACAAAGTAACTTACGTTACTTATTTGAAAAAAGTAACTCAGATATTTTATTGTAAATTGAAAAAAAATGCGTTACTTTACTAGTTACTTAAAAAAAGTAATCTGATTAAATAATAAACAATACGTTACCCCCAACACTGGTAATAGCCAAGTTCCAGGCAAATTCTGAAAGCTTTTCAATGTCTTATTGTCCCTTATTGGCAGGAGAATCACTGTCAGTGGGCTCAAATATTTGGATGGATATCTAAAGATCTAAAGAGGCCAAATGAATACTTCATTTGCAATGATGCAGTGTATAATCTTAAAACTCATAAAAGGGTTTATGCAAGATACAAAAAAGTTTCTCTTAAAAGCTTAAATGCTTATGTGAAAACATACATATGTCATCCCTTGCTTTCTTCTTCAGCTCCATTACAAATAATGCTCAGGCCAAAAGCTAAACCATTTCCATAAAACCATTTGTGATGATGGAATGACTATTACATTAATAAATACATTATTAAGATCCAAAGCTCAGCCTTACGGACACTATATACCCTTCTGCTTTTGGATATAAATTTGTCAGCCCTCAGAAGTAAGAGATGTTTGTGTCAGCTCATTTTTTGTTCCATGTCGTGTTCCATGGGGACTGTCAATGAAGTGTACTCTGTCGCTTTGAATGAGTGTCTTGTAAATGACCAATTAACAAAGGTTGTCTTGTTTATTCTCCAATAGTTTTGTGCCTTTCCCCAAGGATGAAACTGTTTCTGTTTTTAAAAAGAAAAAAATAAATCTTTATATGTTTCACAGTACTCATGGTTGCTGTCAAAGTAAAGCTCAGAAGTGCACTGAATTCAAGTTGGGCTTCATAATAAAAATTCATCCATTCCCACAGTCAACAGATATGTACAGATATTACACGTTAGGTGTCTTCTGACTTGCTGCTCGGATTGCGGCGGTTTATGTGACACTAACGCGAAAACGGATTTCATTCGCATCAAAGGAAAGCATATTTACACTGTCTGAATCGTTCCCTATTCTCTATATAGTGCCATTCACCATGTAGAAACTAGTAAATGTGTGAGCAAATGACCGATGTCAGCCGCAGCTTCAGCGTCTGTAAGAGTGTAGGAGGAGGCGGGACTTCAGATTCTAGAGAGCATTTGATTGGCCTGAAGATTTGACAAGAAACTGAAGTGCGATGTGATGTCATGAAAATCCGTGATCCATTTTAGCGGAAGTGAGAGACTGTAAGTTTTGAATGCTTATATCTCCTAAATGCGAATTTTGTCATTGTTTTGGAACACCAGCTTATTCATAACTTTAAGGCTACCATATTCATACTAAAAGCTAAAAAACTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33517 True 2003 lncRNA 0.35 1 7834816 7836818

Neighbor

gene id symbol gene type direction distance location
CI01000004_07829094_07830772 NA coding downstream 4003 7829003 ~ 7830813 (-)
CI01000004_07805884_07817962 CRTC1 coding downstream 15880 7805653 ~ 7818936 (-)
CI01000004_07792267_07797908 CRSP7 coding downstream 36354 7791898 ~ 7798462 (-)
CI01000004_07784930_07788318 CNN2 coding downstream 46309 7783684 ~ 7788507 (-)
CI01000004_07755406_07758041 NA coding downstream 76775 7755167 ~ 7758041 (-)
CI01000004_07960123_07960701 NA coding upstream 123286 7958746 ~ 7961208 (-)
CI01000004_07998445_08008810 HLTF coding upstream 161415 7997249 ~ 8008810 (-)
CI01000004_08010634_08013275 NCK1A coding upstream 173041 8009859 ~ 8013275 (-)
CI01000004_08030758_08033803 SLC35G2, SLC35G2A, SLC35G2B coding upstream 193693 8030511 ~ 8033803 (-)
CI01000004_08049634_08054074 NA coding upstream 212319 8049137 ~ 8054511 (-)
G29608 NA non-coding downstream 12753 7821842 ~ 7822063 (-)
G29552 NA non-coding downstream 30588 7800957 ~ 7804228 (-)
G29556 NA non-coding downstream 34064 7800447 ~ 7800752 (-)
G29542 NA non-coding downstream 34535 7798550 ~ 7800281 (-)
G29544 NA non-coding downstream 54749 7775273 ~ 7780067 (-)
G29562 NA non-coding upstream 62540 7899358 ~ 7904097 (-)
G29663 NA non-coding upstream 187133 8023951 ~ 8025200 (-)
G29388 NA other downstream 1202909 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 1289244 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 2207302 5616644 ~ 5628289 (-)
G27746 NA other downstream 2631092 5178227 ~ 5203724 (-)
G26788 NA other downstream 4559095 3267683 ~ 3275721 (-)
G29656 NA other upstream 127546 7964364 ~ 7965500 (-)
G29746 NA other upstream 517680 8354498 ~ 8358127 (-)
G30316 NA other upstream 1541119 9377937 ~ 9406921 (-)
G31203 NA other upstream 2909619 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 3570647 11406957 ~ 11412907 (-)

Expression


Co-expression Network