Gene
RNA
| Item | Value |
|---|---|
| gene id | G29844 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 8410726 ~ 8411219 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU33771 | False | 347 | lncRNA | 0.38 | 1 | 8410726 | 8411072 |
| TU33772 | False | 494 | lncRNA | 0.48 | 1 | 8410726 | 8411219 |
| TU33770 | False | 337 | lncRNA | 0.38 | 1 | 8410736 | 8411072 |
| TU33773 | True | 484 | lncRNA | 0.32 | 1 | 8410736 | 8411219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_08361560_08363939 | GHSR, GHSRA | coding | downstream | 46707 | 8361268 ~ 8364019 (-) |
| CI01000004_08258929_08273708 | NA | coding | downstream | 136927 | 8258778 ~ 8273799 (-) |
| CI01000004_08249849_08251049 | NA | coding | downstream | 159419 | 8249668 ~ 8251307 (-) |
| CI01000004_08233410_08241216 | NA | coding | downstream | 169407 | 8233178 ~ 8241319 (-) |
| CI01000004_08113788_08117378 | NCEH1A | coding | downstream | 292647 | 8113374 ~ 8118079 (-) |
| CI01000004_08587419_08590454 | NA | coding | upstream | 176108 | 8587327 ~ 8590557 (-) |
| CI01000004_08592797_08594424 | CLDN11A | coding | upstream | 181095 | 8592314 ~ 8594619 (-) |
| CI01000004_08714010_08716995 | NA | coding | upstream | 302663 | 8713882 ~ 8717059 (-) |
| CI01000004_08847888_08849951 | NA | coding | upstream | 435539 | 8846758 ~ 8850028 (-) |
| CI01000004_08857253_08860111 | RABGGTB | coding | upstream | 446034 | 8857253 ~ 8860111 (-) |
| G29833 | NA | non-coding | downstream | 39484 | 8369150 ~ 8371242 (-) |
| G29829 | NA | non-coding | downstream | 51624 | 8358903 ~ 8359102 (-) |
| G29750 | NA | non-coding | downstream | 71180 | 8337169 ~ 8339546 (-) |
| CI01000004_08049634_08054074 | NA | non-coding | downstream | 324696 | 8049137 ~ 8054511 (-) |
| G29663 | NA | non-coding | downstream | 385526 | 8023951 ~ 8025200 (-) |
| G29865 | NA | non-coding | upstream | 11843 | 8423062 ~ 8432906 (-) |
| G29846 | NA | non-coding | upstream | 71437 | 8482656 ~ 8523479 (-) |
| G29899 | NA | non-coding | upstream | 113086 | 8524305 ~ 8525995 (-) |
| G29900 | NA | non-coding | upstream | 116219 | 8527438 ~ 8527680 (-) |
| G29903 | NA | non-coding | upstream | 127645 | 8538864 ~ 8539102 (-) |
| G29746 | NA | other | downstream | 52599 | 8354498 ~ 8358127 (-) |
| G29656 | NA | other | downstream | 445226 | 7964364 ~ 7965500 (-) |
| G29388 | NA | other | downstream | 1778819 | 6631293 ~ 6631907 (-) |
| CI01000004_06539836_06541252 | NA | other | downstream | 1865154 | 6538904 ~ 6541252 (-) |
| CI01000004_05617072_05627369 | NA | other | downstream | 2783212 | 5616644 ~ 5628289 (-) |
| G30316 | NA | other | upstream | 966718 | 9377937 ~ 9406921 (-) |
| G31203 | NA | other | upstream | 2335218 | 10746437 ~ 10750641 (-) |
| CI01000004_11407198_11412220 | ADCYAP1B, ADCYAP1 | other | upstream | 2996246 | 11406957 ~ 11412907 (-) |
| G32150 | NA | other | upstream | 3365300 | 11776519 ~ 11780951 (-) |
| G32207 | NA | other | upstream | 3964949 | 12376168 ~ 12384780 (-) |
