LOC122349555 (LOC107704198,LOC107750288,LOC107658248,LOC107567655)


Basic Information

Item Value
gene id LOC122349555
gene name LOC107704198,LOC107750288,LOC107658248,LOC107567655
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 1991 ~ 4067 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251465.1
CGCCATCATTTGTGAACTCGCACTGAAGAACCCCGAGATTGTGGCCCAGCGGGGAGGTTTGAGCACCATCCTGAAGAACGTCATTGACTGTCAGCTGAGCCGCATCAACGAGGCCCTGATCACCACCATACTGCACCTGCTCAATCACCCACACACGCCAGTACATACGTGCTGATGTTGAACTGGAGcaaattctTGCACCTTACACAGATTTTCACTACAGACACAGCCCTGACACAGCAGAGGCACAAATCAAGGAGGACAGAGAAGCTCGTTTTTTAGCCAGTAAAATGGCTATCATTGCAGCCTTCCGCTCGTGGTCAGGTATTATTAACCTGTGTAAATCAGGGAACTCAGGAGTCCAGTCTTTGATAGGCCTGCTTTGTATACCAAACATGGAAGTCAGGAAAGCCTTATTAGAGGTCATGTATGAGATCTTCAGGTTGCCTGTTCCTATAGTGACAGGAGATTTTGAG

Function

NR:

description
PREDICTED: rapamycin-insensitive companion of mTOR-like isoform X1

GO:

id name namespace
GO:0031929 TOR signaling biological_process
GO:0031932 TORC2 complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251465.1 True 476 lncRNA 0.48 6 1991 4067

Neighbor

gene id symbol gene type direction distance location
LOC122348751 sh2b3,LOC107594562,LOC107550292 coding upstream 4196 8263 ~ 15074 (-)
LOC122349836 NA coding upstream 19537 23604 ~ 23703 (-)
trnan-guu_33 NA coding upstream 276715 280782 ~ 280855 (-)
tifa tifab,LOC107742334,LOC107692005,LOC107659708,LOC107753989,LOC107588127 coding upstream 279266 283333 ~ 285000 (-)
tnfsf10l LOC107691962,LOC107562848,LOC107742295,LOC107701536,LOC107753950,LOC108410411,LOC103041464 coding upstream 335758 339825 ~ 358332 (-)
LOC122349723 rictora,LOC107658248,LOC107725140,LOC107704198 non-coding downstream 127 1457 ~ 1864 (-)
G48720 NA non-coding upstream 52338 56405 ~ 64136 (-)
G48733 NA non-coding upstream 83483 87550 ~ 89420 (-)
G48736 NA non-coding upstream 116952 121019 ~ 121395 (-)
G48741 NA non-coding upstream 165932 169999 ~ 170927 (-)
G48743 NA non-coding upstream 168227 172294 ~ 173013 (-)
si:dkey-112a7.4 si:dkey-112a7.4 other upstream 207274 211341 ~ 213685 (-)
G48823 LOC107667730 other upstream 266302 270369 ~ 274498 (-)
LOC122348397 zgc:92429,LOC107588137,LOC107753943,LOC107668941,LOC103044742,LOC108434854,LOC108267498 other upstream 815570 819637 ~ 829670 (-)
zgc:162171 zgc:162171,LOC107588217,LOC107753986,LOC107742285,LOC107691949,LOC107668889,LOC103045050 other upstream 876519 880586 ~ 888958 (-)
zgc:153151 NA other upstream 1036855 1040922 ~ 1046317 (-)

Expression


Co-expression Network