G59688


Basic Information

Item Value
gene id G59688
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 236074 ~ 236657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88237
tgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtttttgtgtgtgtgtgtgtgtctgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtatgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgt
>TU88239
tgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtttttgtgtgtgtgtgtgtgtctgtatctgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtatgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgt

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88237 True 529 lncRNA 0.47 2 236074 236657
TU88239 False 527 lncRNA 0.47 2 236074 236657

Neighbor

gene id symbol gene type direction distance location
LOC122350625 LOC107694826,LOC107583205,LOC107757045,LOC107747425,LOC107569528,LOC107675400 coding downstream 153046 7 ~ 83028 (-)
fbxl17 fbxl17,LOC107704582,LOC107712428,LOC107661528,LOC107737136,LOC107570989 coding upstream 125921 362578 ~ 532388 (-)
slc35d2 slc35d2,LOC107570982,LOC107570985 coding upstream 321599 558256 ~ 563214 (-)
LOC122350794 LOC107661539,LOC107704586,LOC107726870,LOC107568101,LOC107581163 coding upstream 335926 572583 ~ 576178 (-)
ubox5 NA coding upstream 344372 581029 ~ 586701 (-)
lzts3b lzts3,LOC107569677,LOC107712591,LOC107661533 coding upstream 352141 588798 ~ 601844 (-)
G59654 NA non-coding downstream 152221 83574 ~ 83853 (-)
G59739 NA non-coding upstream 278110 514767 ~ 551882 (-)
G59750 NA non-coding upstream 309262 545919 ~ 547911 (-)
G60016 NA non-coding upstream 378624 615281 ~ 617472 (-)
G60036 NA non-coding upstream 423778 660435 ~ 661098 (-)
G60003 NA non-coding upstream 486533 723190 ~ 725000 (-)
ccl27a NA other upstream 329229 565886 ~ 570973 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other upstream 486488 723145 ~ 731844 (-)
csgalnact1b LOC107712620 other upstream 496136 732793 ~ 739372 (-)
G60098 NA other upstream 898744 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 904041 1140698 ~ 1159286 (-)

Expression


Co-expression Network