XLOC_000704 (dla)


Basic Information

Item Value
gene id XLOC_000704
gene name dla
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 54013457 ~ 54026352 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001176
ATACAAACGCACAGTGTCGGCGGGAGAAGGACGTGAGGAGGGATGTTGGACCAGTGACGAACCCTGGTTTAATATCAGACGAAGAAGGAACTATACACGACGAGCATCTGTCCTACTTTTCTTCTCCGACATTTGAGGATTATATATCACGGAATTCAACAAGTCCGTTTTACTTCAGGACTTTctggactcttttttttttctcccggGGAAGAACTGTTGCATTGTGCGCACTTGACATGAATGGGAACTGCGTTCACGCTCAGTCTGTACTGAATGCAAGTCTCCACCAATGAATCAGTCGGCGAAAAGAGAAGGCTTTTAATACAAGGGATCCCCTGACTGATCTGAGATCAGCCAAGTTGCTCAGAGACTTTCACAaaatcctatttatttatttattcatcatgggACGCCACTTACTGTTGCTCCTCTTCTCCATCCTCTACATGCTGCTCTGCCAGGCGTCCTCCTCAGGCGTCTTCGAGCTCAAGTTGCAGGAGTTTTTAAACAAGAAGGGCGTGCAAGGAAACAAGAACTGCTGTAAAGGTGGACTGACTACCTCTTACCAGCAGTGCGAGTGCAAGACTTTTTTCCGCATCTGCTTAAAGCATTATCAGCCCAATGCGTCTCCAGAGCCGCCCTGCACTTATGGAGGCACCGTCACCCCTGTGCTGGGCTCCAACTCTTTCCAAGTGCCAGATACCTTACCGGATGGCTCTTTCACCAATCCCATCAGGATGAATTTCGGTTTCACGTGGCCGggaacTTTTTCTCTTATAATCGAAGCACTGCATGCTGACTCCAAAGAGGATCTGACAACAGAAAACCCAGAGCGCATCATCAGTACCATGACCACACAGAGGCACTTGACTGTGGGTGAGGATTGGTCTCAGGACCTGCACAGTGTGGGACGAACCGAGCTCAAGTACTCCTACCGTTTTGTGTGCGACGAACACTACTATGGTGAAGGATGCTCAGTGTTCTGCCGGCCCAGAGACGATGCATTCGGTCACTTCACCTGTGGAGAACGTGGAGAAATCATCTGCGATGCTGGGTGGAAAGGCCAATACTGCACAGAACCTATCTGCCTGCCAGGGTGCGACGAGGAGCATGGATTCTGTGAGAAACCTGGCGAGTGCAAGTGCAGAGTGGGCTTTAAAGGGCGCTACTGTGATGAGTGTATACGCTACCCAGGATGCCTTCACGGTACCTGCCAACAGCCATGGCAATGCAACTGCCAGGAAGGCTGGGGTGGGCTCTTCTGCAACCAAGATCTGAACTACTGCACACATCATAAGCCCTGTCTGAATGGAGCCACTTGTAGTAACACGGGCCAGGGCAGCTACACCTGTTCCTGTCGGCCAGGATTCTCAGGAGCCAGCTGTGAGATCGAGGTCAACGAATGCACTGGAAACCCCTGCCGCAACGGAGGAAGCTGCACTGACATGGAGAACACCTACAGCTGTACCTGTCCACCTGGCTTCTATGGGAAGAATTGTGAACTTAGTGCCATGACATGCGCGGATGGGCCATGCTTTAATGGTGGACGCTGTGCTGACAACCCAGATGGTGGTTACTTCTGCCAGTGTCCCACTGGATATGCTGGGTTCAACTGTGAAAAGAAGATCGACCACTGCTCTTCCAGCCCATGCTCAAACGGTGCACGCTGTGTCGACTTGGTCAACTCTTACCTGTGCCAGTGTCCGGACGGGTTTACAGGCATGAACTGTGATCGCGCCGGAGATGAGTGTTCGATGTACCCTTGCCAAAACGGCGGGACCTGCCAGGAAGGCGCCAGCGGTTATATGTGCACATGCCCGCCTGGTTACACCGGACGCAACTGCAGCTCTCCTGTGAGCCGCTGCCAACACAACCCATGCCACAATGGCGCCACTTGCCACGAAAGGAACAATCGTTACGTGTGCGCCTGCGTTTCGGGATATGGAGGACGCAATTGTCAATTTTTGCTTCCGGACAGAGCTTCCCAAATTGGCAGCGACGTTCCCTGGACTGCTGTGGGATCGGGAGTGTTGCTGGTGTTATTGTTGGTCGTGGCGTGTGCAGTAGTCGTAGTTTGTGTTCGTTCAAAGGTTCAGCAGCGACGACGGGATAGAGAGGATGAAGTCGCCAATGGAGAAAACGAAACCATTAATAATCTCACAAACAACTGCCACCGGGATAAAGATCTGGCTGTTAGTGTTGTGGGAGTGGCGCCGGTTAAGAATATCAACAAGAAGATCGACTTCAGCAGCGATCACGACGATTTGAGTATGACGACGGAGAAGCGGAGCTATAAGACGCGGCATGCGCCTGCAGACTACAACCTGGTGCATGAGGTTAAATTCGAAGTCAAGCACGAGGTGAAACTGGAGCATGCTGGGAAGGAGACGACGATGGCAAACGAGCTGTCCGATAGCTGCGAGGATATAAAGTGCCAATCCCAGCAGGACTCTTCCGAGTGTACAGAGGAGAAGCGCAGGAAACGTCtgaaaagtGACGCATCAGAAAAGTCAAAATATTCAGAGTCAAGGTATTCCGAATCAAAGTACTCAGAATCAAAGTATTCGGAATCAAAGTACTCCGATGTATCGCTGTATTCCGAGTCAGCATGTGCGTCGGCATGTGCATCGGCATCCACGTCGGCTTGTGTCGACACCAAATACAAATCCGTCATGGTGATGTCGGAGGAAAAAGATGAATGTGTAATTGCAACTGAGGTGTAATGGGCCTGCAGGATGCCGATGCTCATTGTGTCCTATGGGAGACATTTTGAACTCCCGGAGAAAATGCTGCTGCTCGAAACCTTAGGTGGAAACGTCCCACCTCGTGACTACTGCTGCTGAGAAACTAAGACTGATTAACTGATATTCAGGATGAGCTGGTTCTCTGTACTGAAAGAGGCGCAGGCAGTGGTGGCCTGTAGGCTTGGAAACTTGTGGAAATGATCATGAGTGTCATTAACATTTCAAATGTAGTTGTAAAATTTACCTGTAAAGCCATTTTTAAAGGGTGTTGGACAGTGTgtgtccattaaaaaaaaaaaaaaaaaacattctcatcACACGACAATGGCATTTGGCAATGGCAAACGAAAGAGAAGGGAACACAAGGAACCTAAAAGTTTTACGCCATGCGATGTCCAATACTGTGTCAGCATTGTGGCAATGTTTTAGCAATATTTTGGCaacatttgctgtttttttccgCCAATAATAATTCCCACAGGCTTTTAACTGTGCCCAGAGACTGCACCAAACATGAATGATGTTATGGacgtagttaaaaaaaataaataaataaaaatgtgtcgcAATTTGCCGTCGACGGACCAATTTGTGATATCATTTTAGCAATATTTTGGCAACATTTGCTGGCCCCACAAGTCAGTGTACAAGGGACTACATCAAAACGGTGGATATTCAGCCATACTGGCCTAACTTGCACTGGGTTAAAATGTCACATGATGTCATATCCTGTCACATGACCAGTGAAAACTATGTGTGTTACTTGATCACTGTGTAAATGGGAAAATaagtgctcaaaaaaaaaaagaaaaagaaaaaaatctcaaAGTCTTCCAAGCCTCCGCTTTTTTTGCATTATGGTTTAGAAAATGTACGTAATGATTTGTTGAGTTTGTGTTGATGCTGAATAATATCCTTTGTCTCTATGtttcttgttttgctttttataacAAGAGTTGTatgatttaagttaatttatttttatttaagttgtatttctaaatatttgtaatgtttttaagattatttaagttttttttgttcCTAAGTTGCTCCTGTTACTTGCAAAGGCACTTCGGGTTGCTGGGATTGTTTtgagaaaatgttatttaaagaaggattgtaaaaaaaatgttattaatgatGTCATTAACAGGCTTTTCGTTTGattgttttctttctctgaatgaAGTTTAGCTTAaattatttttccaaataaagaTTATGAACTATTGAAAA
>TCONS_00001177
GCACAGTGTCGGCGGGAGAAGGACGTGAGGAGGGATGTTGGACCAGTGACGAACCCTGGTTTAATATCAGACGAAGAAGGAACTATACACGACGAGCATCTGTCCTACTTTTCTTCTCCGACATTTGAGGATTATATATCACGGAATTCAACAAGTCCGTTTTACTTCAGGACTTTctggactcttttttttttctcccggGGAAGAACTGTTGCATTGTGCGCACTTGACATGAATGGGAACTGCGTTCACGCTCAGTCTGTACTGAATGCAAGTCTCCACCAATGAATCAGTCGGCGAAAAGAGAAGGCTTTTAATACAAGGGATCCCCTGACTGATCTGAGATCAGCCAAGTTGCTCAGAGACTTTCACAaaatcctatttatttatttattcatcatgggACGCCACTTACTGTTGCTCCTCTTCTCCATCCTCTACATGCTGCTCTGCCAGGCGTCCTCCTCAGGCGTCTTCGAGCTCAAGTTGCAGGAGTTTTTAAACAAGAAGGGCGTGCAAGGAAACAAGAACTGCTGTAAAGGTGGACTGACTACCTCTTACCAGCAGTGCGAGTGCAAGACTTTTTTCCGCATCTGCTTAAAGCATTATCAGCCCAATGCGTCTCCAGAGCCGCCCTGCACTTATGGAGGCACCGTCACCCCTGTGCTGGGCTCCAACTCTTTCCAAGTGCCAGATACCTTACCGGATGGCTCTTTCACCAATCCCATCAGGATGAATTTCGGTTTCACGTGGCCGggaacTTTTTCTCTTATAATCGAAGCACTGCATGCTGACTCCAAAGAGGATCTGACAACAGAAAACCCAGAGCGCATCATCAGTACCATGACCACACAGAGGCACTTGACTGTGGGTGAGGATTGGTCTCAGGACCTGCACAGTGTGGGACGAACCGAGCTCAAGTACTCCTACCGTTTTGTGTGCGACGAACACTACTATGGTGAAGGATGCTCAGTGTTCTGCCGGCCCAGAGACGATGCATTCGGTCACTTCACCTGTGGAGAACGTGGAGAAATCATCTGCGATGCTGGGTGGAAAGGCCAATACTGCACAGAACCTATCTGCCTGCCAGGGTGCGACGAGGAGCATGGATTCTGTGAGAAACCTGGCGAGTGCAAGTGCAGAGTGGGCTTTAAAGGGCGCTACTGTGATGAGTGTATACGCTACCCAGGATGCCTTCACGGTACCTGCCAACAGCCATGGCAATGCAACTGCCAGGAAGGCTGGGGTGGGCTCTTCTGCAACCAAGATCTGAACTACTGCACACATCATAAGCCCTGTCTGAATGGAGCCACTTGTAGTAACACGGGCCAGGGCAGCTACACCTGTTCCTGTCGGCCAGGATTCTCAGGAGCCAGCTGTGAGATCGAGGTCAACGAATGCACTGGAAACCCCTGCCGCAACGGAGGAAGCTGCACTGACATGGAGAACACCTACAGCTGTACCTGTCCACCTGGCTTCTATGGGAAGAATTGTGAACTTAGTGCCATGACATGCGCGGATGGGCCATGCTTTAATGGTGGACGCTGTGCTGACAACCCAGATGGTGGTTACTTCTGCCAGTGTCCCACTGGATATGCTGGGTTCAACTGTGAAAAGAAGATCGACCACTGCTCTTCCAGCCCATGCTCAAACGGTGCACGCTGTGTCGACTTGGTCAACTCTTACCTGTGCCAGTGTCCGGACGGGTTTACAGGCATGAACTGTGATCGCGCCGGAGATGAGTGTTCGATGTACCCTTGCCAAAACGGCGGGACCTGCCAGGAAGGCGCCAGCGGTTATATGTGCACATGCCCGCCTGGTTACACCGGACGCAACTGCAGCTCTCCTGTGAGCCGCTGCCAACACAACCCATGCCACAATGGCGCCACTTGCCACGAAAGGAACAATCGTTACGTGTGCGCCTGCGTTTCGGGATATGGAGGACGCAATTGTCAATTTTTGCTTCCGGACAGAGCTTCCCAAATTGGCAGCGACGTTCCCTGGACTGCTGTGGGATCGGGAGTGTTGCTGGTGTTATTGTTGGTCGTGGCGTGTGCAGTAGTCGTAGTTTGTGTTCGTTCAAAGGTTCAGCAGCGACGACGGGATAGAGAGGATGAAGTCGCCAATGGAGAAAACGAAACCATTAATAATCTCACAAACAACTGCCACCGGGATAAAGATCTGGCTGTTAGTGTTGTGGGAGTGGCGCCGGTTAAGAATATCAACAAGAAGATCGACTTCAGCAGCGATCACGACGATTTGAGTATGACGACGGAGAAGCGGAGCTATAAGACGCGGCATGCGCCTGCAGACTACAACCTGGTGCATGAGGTTAAATTCGAAGTCAAGCACGAGGTGAAACTGGAGCATGCTGGGAAGGAGACGACGATGGCAAACGAGCTGTCCGATAGCTGCGAGGATATAAAGTGCCAATCCCAGCAGGACTCTTCCGAGTGTACAGAGGAGAAGCGCAGGAAACGTCtgaaaagtGACGCATCAGAAAAGTCAAAATATTCAGAGTCAAGGTATTCCGAATCAAAGTACTCAGAATCAAAGTATTCGGAATCAAAGTACTCCGATGTATCGCTGTATTCCGAGTCAGCATGTGCGTCGGCATGTGCATCGGCATCCACGTCGGCTTGTGTCGACACCAAATACAAATCCGTCATGGTGATGTCGGAGGAAAAAGATGAATGTGTAATTGCAACTGAGGTGAGTAGTAGTCACACACGTCAGCTCAAAATGCTCATATACAGTGCCCAACATAAACGAGAGtactttttataaatttttcaaTGAATATAGACAATACATTTTGGTGTATTTAAGCAAAACAGTTATAATCAGcaattatatttgttaaaataataattttgacacaGTATATCATTAGGtatagaaaaaatattcatataaatttaaattaggtattgcaaaaaagaaatacaactacaaatttttaactatatttaatattttgtatgtttcttttgatttttcctctttattaagatttgtattgatatttttaatacatattaatgCAGTTGCACTATTTTTAGAGCTACTTTATTAAATTAGTTTTGACTTTGATAGTGACTATTGagtttaatgcattaaatatgTACTGCTTTTTAGTCAGAAAGATGCATAAAGAATCAGTAAGACATCAATTGTTTTGCTGGGAAaaaaattgttgacatttttttccTCTCTgaatcaaaaatattaatattataaaacaaattacaagaaaatatacatttaaaagagatctgtgaggggtgtactcatttatgctgcccactgtatatataaaaatgcgTCCTTACATTGAATCTGAGAACTAACAGAGTGTTTTTCCTCTTCCCGATCACAGGTGTAATGGGCCTGCAGGATGCCGATGCTCATTGTGTCCTATGGGAGACATTTTGAACTCCCGGAGAAAATGCTGCTGCTCGAAACCTTAGGTGGAAACGTCCCACCTCGTGACTACTGCTGCTGAGAAACTAAGACTGATTAACTGATATTCAGGATGAGCTGGTTCTCTGTACTGAAAGAGGCGCAGGCAGTGGTGGCCTGTAGGCTTGGAAACTTGTGGAAATGATCATGAGTGTCATTAACATTTCAAATGTAGTTGTAAAATTTACCTGTAAAGCCATTTTTAAAGGGTGTTGGACAGTGTgtgtccattaaaaaaaaaaaaaaaaaacattctcatcACACGACAATGGCATTTGGCAATGGCAAACGAAAGAGAAGGGAACACAAGGAACCTAAAAGTTTTACGCCATGCGATGTCCAATACTGTGTCAGCATTGTGGCAATGTTTTAGCAATATTTTGGCaacatttgctgtttttttccgCCAATAATAATTCCCACAGGCTTTTAACTGTGCCCAGAGACTGCACCAAACATGAATGATGTTATGGacgtagttaaaaaaaataaataaataaaaatgtgtcgcAATTTGCCGTCGACGGACCAATTTGTGATATCATTTTAGCAATATTTTGGCAACATTTGCTGGCCCCACAAGTCAGTGTACAAGGGACTACATCAAAACGGTGGATATTCAGCCATACTGGCCTAACTTGCACTGGGTTAAAATGTCACATGATGTCATATCCTGTCACATGACCAGTGAAAACTATGTGTGTTACTTGATCACTGTGTAAATGGGAAAATaagtgctcaaaaaaaaaaagaaaaagaaaaaaatctcaaAGTCTTCCAAGCCTCCGCTTTTTTTGCATTATGGTTTAGAAAATGTACGTAATGATTTGTTGAGTTTGTGTTGATGCTGAATAATATCCTTTGTCTCTATGtttcttgttttgctttttataacAAGAGTTGTatgatttaagttaatttatttttatttaagttgtatttctaaatatttgtaatgtttttaagattatttaagttttttttgttcCTAAGTTGCTCCTGTTACTTGCAAAGGCACTTCGGGTTGCTGGGATTGTTTtgagaaaatgttatttaaagaaggattgtaaaaaaaatgttattaatgatGTCATTAACAGGCTTTTCGTTTGattgttttctttctctgaatgaAGTTTAGCTTAaattatttttccaaataaagaTTATGAACTATTGAAAACACGTTGTCGTTGTTTCATCAACCCTGCACTAGGCACTACTATTATTCGAAaataacgaacaaacaaaacGTAGAATATTCAAATTCCAATATTACACattcaaatataacaaacaatttttacatttcaaaacttTGAATATGTAAATTCcaataatatattcaaatataa

Function

symbol description
dla Predicted to enable Notch binding activity. Acts upstream of or within several processes, including animal organ development; floor plate development; and regulation of Notch signaling pathway. Located in cell cortex and plasma membrane. Is expressed in several structures, including ectoderm; nervous system; neural keel; neural plate; and neural tube. Orthologous to human DLL1 (delta like canonical Notch ligand 1).

GO:

id name namespace
GO:0021536 diencephalon development biological_process
GO:0045746 negative regulation of Notch signaling pathway biological_process
GO:0007219 Notch signaling pathway biological_process
GO:0060113 inner ear receptor cell differentiation biological_process
GO:0030154 cell differentiation biological_process
GO:0055016 hypochord development biological_process
GO:0009880 embryonic pattern specification biological_process
GO:0007275 multicellular organism development biological_process
GO:0001525 angiogenesis biological_process
GO:0033504 floor plate development biological_process
GO:0014032 neural crest cell development biological_process
GO:0008593 regulation of Notch signaling pathway biological_process
GO:0007399 nervous system development biological_process
GO:0060034 notochord cell differentiation biological_process
GO:0030901 midbrain development biological_process
GO:0022008 neurogenesis biological_process
GO:0007154 cell communication biological_process
GO:0021514 ventral spinal cord interneuron differentiation biological_process
GO:0005886 plasma membrane cellular_component
GO:0005938 cell cortex cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005112 Notch binding molecular_function
GO:0005509 calcium ion binding molecular_function
GO:0005515 protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-980526-29 Predicted to enable Notch binding activity. Acts upstream of or within several processes, including animal organ development; floor plate development; and regulation of Notch signaling pathway. Located in cell cortex and plasma membrane. Is expressed in several structures, including ectoderm; nervous system; neural keel; neural plate; and neural tube. Orthologous to human DLL1 (delta like canonical Notch ligand 1).

Ensembl:

ensembl_id ENSDARG00000010791

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001176 False 3986 mRNA 0.46 11 54013457 54026180
TCONS_00001177 True 4817 mRNA 0.43 10 54013465 54026352

Neighbor

gene id symbol gene type direction distance location
XLOC_000703 NA coding upstream 24681 53982614 ~ 53988776 (+)
XLOC_000702 ccsapa coding upstream 49524 53954230 ~ 53963933 (+)
XLOC_000701 acta1a coding upstream 59925 53945934 ~ 53953532 (+)
XLOC_000700 nup133 coding upstream 71551 53919110 ~ 53941906 (+)
XLOC_000699 NA coding upstream 147620 53864528 ~ 53865837 (+)
XLOC_000705 triobpa coding downstream 10725 54037077 ~ 54062112 (+)
XLOC_000706 dcaf15 coding downstream 43098 54069450 ~ 54084665 (+)
XLOC_000707 rln3b coding downstream 89487 54115839 ~ 54118052 (+)
XLOC_000708 LO017722.1 coding downstream 97857 54124209 ~ 54126428 (+)
XLOC_000709 TNPO2 coding downstream 110737 54137089 ~ 54146461 (+)
XLOC_000697 NA non-coding upstream 242718 53760797 ~ 53770739 (+)
XLOC_000695 NA non-coding upstream 317902 53688977 ~ 53695555 (+)
XLOC_000694 NA non-coding upstream 355168 53656231 ~ 53658289 (+)
XLOC_000710 CABZ01067150.1 non-coding downstream 159687 54186039 ~ 54186156 (+)
XLOC_000712 NA non-coding downstream 250891 54277243 ~ 54469289 (+)
XLOC_000713 NA non-coding downstream 375581 54401933 ~ 54404147 (+)
XLOC_000715 NA non-coding downstream 585486 54611838 ~ 54613479 (+)
XLOC_000721 NA non-coding downstream 671821 54698173 ~ 54700755 (+)

Expression


Co-expression Network