G59914


Basic Information

Item Value
gene id G59914
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1392143 ~ 1393428 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88634
CTCCTGGCTGTAGCTTTGTGTGACGGTCCTGCAGTCTGCATGGCATTACTGTACACTAAACAGCATcaacacattcacacagcagTTAACTAcagtaaaaccataaaaaaacattattacttgaagttaaaaaaaaaagcattaacctaaatgaaaaaaaaaaaaaaatcagctagttgccaaagcaacttttctatttattttgtaaaatattagattgttttacaaaatatttgttttacaaaaatagtataaaatattgtgaaatatttttacaatttaaagtaactgcttgtattttaaaatgtcatttattgatgcaatgcaatgatttattttgctcGAGAAATATTTCCGATTAttataaaagctgaaaatagtTCATATTTTCGTGGATAAACTATCATGCAAAATATGGGGTTATTACAgctaaatacaaacaaaaaatgaatcatttcattCATCAAGAATgttaaggatgcattaaaaagtcATCAGTGTTACGAAGGatttctatatatttctatattcagttcttctgaacttttttattcatctaatgtatcacagtttatacaaaaataactgttttcaacactgatgatactcagaaatgtttctcgagcagtaaatcagtatattattatgatttctgaaggatcgcgtgacGCTGAAGACCAGAGGAATGAGGctgaaaattcataaaaataaatagcatctcaacataaatataaatatagctattttgaattgtaataatatttctctatttttaccgtaaagacttctttcaaaaacatttacaaactgaATTAACatatagacatattttaaataatgacaataataatagcaaaaaagTACTGAAACACACAACATAATAACAACAGTGTTcgtattaaagttaaaaattcacacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacatatacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88634 True 1025 lncRNA 0.29 2 1392143 1393428

Neighbor

gene id symbol gene type direction distance location
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding upstream 125909 1253631 ~ 1266234 (+)
LOC122350095 NA coding upstream 148985 1236932 ~ 1243158 (+)
trim36 trim36 coding upstream 156566 1219724 ~ 1235577 (+)
LOC122350068 ccdc112,LOC107573794,LOC107578772 coding upstream 182500 1204241 ~ 1209643 (+)
LOC122350615 fem1c,LOC107728259,LOC107572967,LOC106580179 coding upstream 192206 1188348 ~ 1199937 (+)
LOC122350265 rasal1 coding downstream 62803 1456231 ~ 1481554 (+)
LOC122351062 NA coding downstream 165692 1559120 ~ 1560367 (+)
LOC122350660 NA coding downstream 255050 1648478 ~ 1649618 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding downstream 409267 1802695 ~ 1807402 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding downstream 429208 1822636 ~ 1827411 (+)
G59899 NA non-coding upstream 123469 1268438 ~ 1268674 (+)
G59898 NA non-coding upstream 123751 1268184 ~ 1268392 (+)
G59877 NA non-coding upstream 227367 1162420 ~ 1164776 (+)
G59876 NA non-coding upstream 230983 1156922 ~ 1161160 (+)
G59845 LOC107698412,LOC107571775,LOC107726226,LOC100537613 non-coding upstream 369229 1021192 ~ 1022914 (+)
G59903 NA non-coding downstream 2619 1396047 ~ 1491642 (+)
G59902 dtx1,LOC107692206,LOC107572068,LOC107671029,LOC101885597 non-coding downstream 8331 1401759 ~ 1494731 (+)
G59938 NA non-coding downstream 165704 1559132 ~ 1648740 (+)
G59940 LOC102197881,LOC106633085 non-coding downstream 168031 1561459 ~ 1694820 (+)
G59939 NA non-coding downstream 189561 1582989 ~ 1780567 (+)
pggt1b pggt1b other upstream 173339 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 540139 842077 ~ 852004 (+)
G59807 NA other upstream 587304 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 841456 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 522032 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 621431 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 637396 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 644271 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 2455186 3848614 ~ 3850557 (+)

Expression


Co-expression Network