G59939


Basic Information

Item Value
gene id G59939
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1582989 ~ 1780567 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88666
CACAGGCAACTATTGTgggcatttattaaatattacacagaGAATAAATAATAGAATGAGAGGCAGATTAATCACACTGTACCATCAACTGTCAAATACtgatttttgttagtttgtgcATTAATGTGTCACGTCTAAAATATGACATCTGTCTGCAGTCCAGGCCGTTCATGTCCATAAACACATCTGCTGTAGTGTACAAACTACATGATTTATCtggaaattattattaagacaaaaaaaagaatcatatcaTATAAATCAACATGGCACAAAAGGCAATTGAACCCATCGTGCAGCAGACAGTGTGACGTGTGCAGAAAACATCTCATAAGTGCTGATATCAGTGTGTAGAAACCCATGCGAACACACTTCAGGTGTATAAAGTGCACAAACACACCAGACAGACAGCAGTGCCATTTAGCATTAAGAGAgtaagagaaacacacacacacacacacacacacacacacacacacacacacacacacacacaggtttctCTGGCCTTCAGTGCGGGATCTGGTTCTGATAATACTGGATCATGTCATACGTTTTGCTCctagaaaaaaagaa
>TU88668
CACAGGCAACTATTGTgggcatttattaaatattacacagaGAATAAATAATAGAATGAGAGGCAGATTAATCACACTGTACCATCAACTGATCAATAAACAAGCAGTGATTCAGAAATATGAAACACCAAGCACCTCTCCTCAAATACATCGTAATACATAAACTCAAATACtgatttttgttagtttgtgcATTAATGTGTCACGTCTAAAATATGACATCTGTCTGCAGTCCAGGCCGTTCATGTCCATAAACACATCTGCTGTAGTGTACAAACTACATGATTTATCTGGAAATtgtttaagacaaaaaaaaagaatcatatcaTATAAATCAACATGGCACAAAAAGGCAATTGAACCCATCATGCAGCAGACAGTGTGGCGTGTGCAGAAAACATCTCATAAGTGCTGATATCAGTGTGTAGAAACCCATGCGAACACACTTCAGGTGTATAAAGTGCACAAACACACCAGACAGACAGCAGTGCCATTTAGCATTAAGAGAgtaagagaaacacacacacacacacacacacacacacacacacacacacacacacacacacaggtttctCTGGCCTTCAGTCACAGGATCTGGTTCTGATAATACTGGATCATGTCATACGTTTTGctcctagaaaaaaaaagaacaaatcatttcatattaaatgttaGGCACAGTTTTTAGtctagaccagtggttcccaaccttttcctGTTTGAgacacccttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88666 False 576 lncRNA 0.39 4 1582989 1780567
TU88668 True 736 lncRNA 0.38 2 1582989 1727001

Neighbor

gene id symbol gene type direction distance location
LOC122351062 NA coding upstream 22622 1559120 ~ 1560367 (+)
LOC122350265 rasal1 coding upstream 101435 1456231 ~ 1481554 (+)
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding upstream 316755 1253631 ~ 1266234 (+)
LOC122350095 NA coding upstream 339831 1236932 ~ 1243158 (+)
trim36 trim36 coding upstream 347412 1219724 ~ 1235577 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding downstream 22128 1802695 ~ 1807402 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding downstream 42069 1822636 ~ 1827411 (+)
LOC122350512 NA coding downstream 156194 1936761 ~ 1946949 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding downstream 186016 1966583 ~ 1995859 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 225517 2006084 ~ 2014684 (+)
G59902 dtx1,LOC107692206,LOC107572068,LOC107671029,LOC101885597 non-coding upstream 88258 1401759 ~ 1494731 (+)
G59903 NA non-coding upstream 91347 1396047 ~ 1491642 (+)
G59914 NA non-coding upstream 189561 1392143 ~ 1393428 (+)
G59899 NA non-coding upstream 314315 1268438 ~ 1268674 (+)
G59898 NA non-coding upstream 314597 1268184 ~ 1268392 (+)
G59982 NA non-coding downstream 19738 1800305 ~ 1802086 (+)
G60248 NA non-coding downstream 104681 1885248 ~ 1886439 (+)
G60258 NA non-coding downstream 127961 1908528 ~ 1911167 (+)
G60265 NA non-coding downstream 166581 1947148 ~ 1950296 (+)
G60269 NA non-coding downstream 172226 1952793 ~ 1953126 (+)
pggt1b pggt1b other upstream 364185 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 730985 842077 ~ 852004 (+)
G59807 NA other upstream 778150 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1032302 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 134893 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 234292 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 250257 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 257132 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 2068047 3848614 ~ 3850557 (+)

Expression


Co-expression Network