G59968


Basic Information

Item Value
gene id G59968
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1724561 ~ 1778486 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88718
tttcctAATGTTACAGACGCTTCGAGCAGGAGTTACTGAAAAATCTAAAggtaatataaaacatttaaataatgactgGGAATGtctttatacaatataaaaaatagctGACAATGTACAGAACATACTTCAATGCGTGCCGTCTGAAGGGAGGCTGATAACGCCATGCTGGAAAATAATTCatgttgcttttaaatgaaggttttgGTTTACTAAAAGagatcaacaaaaataaaaacttcagCTAGAAATCTCTTCAGCGTAATAG

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0022607 cellular component assembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88718 True 268 lncRNA 0.33 2 1724561 1778486

Neighbor

gene id symbol gene type direction distance location
LOC122350660 NA coding upstream 74943 1648478 ~ 1649618 (+)
LOC122351062 NA coding upstream 164194 1559120 ~ 1560367 (+)
LOC122350265 rasal1 coding upstream 243007 1456231 ~ 1481554 (+)
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding upstream 458327 1253631 ~ 1266234 (+)
LOC122350095 NA coding upstream 481403 1236932 ~ 1243158 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding downstream 24209 1802695 ~ 1807402 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding downstream 44150 1822636 ~ 1827411 (+)
LOC122350512 NA coding downstream 158275 1936761 ~ 1946949 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding downstream 188097 1966583 ~ 1995859 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 227598 2006084 ~ 2014684 (+)
G59966 NA non-coding upstream 5462 1711907 ~ 1719099 (+)
LOC122349901 NA non-coding upstream 22365 1701712 ~ 1702196 (+)
G59940 LOC102197881,LOC106633085 non-coding upstream 29741 1561459 ~ 1694820 (+)
G59943 NA non-coding upstream 57576 1652084 ~ 1666985 (+)
G59938 NA non-coding upstream 75821 1559132 ~ 1648740 (+)
G59982 NA non-coding downstream 21819 1800305 ~ 1802086 (+)
G60248 NA non-coding downstream 106762 1885248 ~ 1886439 (+)
G60258 NA non-coding downstream 130042 1908528 ~ 1911167 (+)
G60265 NA non-coding downstream 168662 1947148 ~ 1950296 (+)
G60269 NA non-coding downstream 174307 1952793 ~ 1953126 (+)
pggt1b pggt1b other upstream 505757 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 872557 842077 ~ 852004 (+)
G59807 NA other upstream 919722 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1173874 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 136974 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 236373 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 252338 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 259213 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 2070128 3848614 ~ 3850557 (+)

Expression


Co-expression Network