G59974


Basic Information

Item Value
gene id G59974
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1755120 ~ 1825836 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88724
GCTATAGAACAAGAgcagttttttctttgaaaccTTTGAAAGGTCTACATGTGCCACATTCTTGTAAACATTAAATGCTAATATAACAGATATGcataaaatgaatcattaatatacacatgcatacaatcaaaaatatgtgtatgtgtgtgcgcgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatacacacattaaacacataAAATCGTAGACACTATTCAATTTAAATTGAGCTTTTCTATATTTGGCCCCGGGGTCCCACACCCCCCCTcccctcttttttttatctttccttATCATTTCTATAAACCCCTCCATCACGGGTTTTGTAGACATCCAGTTGAGAAATGCTgctctataatataaaacacatcatgaggaaaaaatacaaattacatgCAGCCGTTTAATGTGACTGTGACTTCAAAAAGgcttttgaatatatatttttttttggatcaaGGCACTGCAGAGATGGCAGAGACAGTAGGTCAACTGTCAAGCCTGTACATGTAACTGCTTGCAGGTAGCAGCCAAGGATGAAAGGCAGCtaagaaatcacacacacacacacacacacacacgtttgtttttgtgaaatgtggGGACATTCTAcaggcataatggtttttacACCGTACAAACTGTAGGTGCTATTGCCCTCTAGCcacttaacctaaccctacctaTTATAGGAAATGTTCCGCATTATGACTATCAAAACAACTCACTCTGTATCATTTATAAGCGTTTTGAAAAGTAGGGAAAATTTTGTAATGCTCATGTCATACCCGTGTCATTGTACGAATGCATTTCCTCATTTATCACAAAAACATGcgcatacacacacacacacacacacacacacgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88724 True 879 lncRNA 0.38 2 1755120 1825836

Neighbor

gene id symbol gene type direction distance location
LOC122350660 NA coding upstream 105502 1648478 ~ 1649618 (+)
LOC122351062 NA coding upstream 194753 1559120 ~ 1560367 (+)
LOC122350265 rasal1 coding upstream 273566 1456231 ~ 1481554 (+)
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding upstream 488886 1253631 ~ 1266234 (+)
LOC122350095 NA coding upstream 511962 1236932 ~ 1243158 (+)
LOC122350512 NA coding downstream 110925 1936761 ~ 1946949 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding downstream 140747 1966583 ~ 1995859 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 180248 2006084 ~ 2014684 (+)
mrpl40 LOC107753002,LOC107559600,LOC107699643,LOC107560058,LOC107754402,LOC107671004 coding downstream 229495 2055331 ~ 2058725 (+)
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding downstream 235705 2061541 ~ 2069288 (+)
G59966 NA non-coding upstream 36021 1711907 ~ 1719099 (+)
LOC122349901 NA non-coding upstream 52924 1701712 ~ 1702196 (+)
G59940 LOC102197881,LOC106633085 non-coding upstream 60300 1561459 ~ 1694820 (+)
G59943 NA non-coding upstream 88135 1652084 ~ 1666985 (+)
G59938 NA non-coding upstream 106380 1559132 ~ 1648740 (+)
G60248 NA non-coding downstream 59412 1885248 ~ 1886439 (+)
G60258 NA non-coding downstream 82692 1908528 ~ 1911167 (+)
G60265 NA non-coding downstream 121312 1947148 ~ 1950296 (+)
G60269 NA non-coding downstream 126957 1952793 ~ 1953126 (+)
G60281 vdac3,LOC107671013,LOC107559564 non-coding downstream 141284 1967120 ~ 1999468 (+)
pggt1b pggt1b other upstream 536316 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 903116 842077 ~ 852004 (+)
G59807 NA other upstream 950281 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1204433 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 89624 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 189023 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 204988 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 211863 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 2022778 3848614 ~ 3850557 (+)

Expression


Co-expression Network