ccl27a


Basic Information

Item Value
gene id ccl27a
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 565886 ~ 570973 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88755
CGACGCTCGCACGTCTTTAAGACGGCTCTTCTGCGTTCATTCACAAGCTCTCCAGCCATGAAGCTCAGAACTACATCTGTCCTGCCGCTCGCCTTCGTCGTCgtcaccatcatcatcctcaccaGCACCGAAGTGGATGGCATTCCCAGCTGTTGTGTGAGACTTTCAAAGAACATCCCTCGGAGCAAGCTGCGTTTGGTCACCAAGCACGAGATGCAGCTCAAGTCTGGAGTGTGTGACATCGACGCAGCGATATTGCACGTCGGAAAGCAGAGGATCTGTGTTCATCCTAAAGTCTTAAAACTTTTGAAGAGACTCAAGAAGCAACGCAAAGCCAAACGGATTCAAGCTAagattaaataaacatcatcatcTGGTTTATGAGGCACTCGCTGGattgcatgttttaatatttttttactataaactGTATATAATCTCTGAATACTCTGCTCTTTCATGCaataaaatgcctttttttaaaatgaaatgcatgatgGATAAGAAGTGAATATTCTAGACGCTGTCACATTCTCTAAAAGAAAAAGTACAAGAAGCATCATGTTTCTAAAGCACACGTGTACATGAACGTAAACAAGCTGAGGATATGaatgaaaaacctttattgGTTTTCTGTGGCGTTAAGCGTCTCTTTATACATCGGATCGCTTTAGTCTTTAAATGAAACGAGCAAAAACATGAAGGGCATGATCAGGTTacactgaaactaaaattaaaacgatGGACAACTCTGCagaaaggaaacaaaaacaCGTCTTGTGCAGAATTACGTAAGTGGAAAAtattacagcaaagctgttttcaacacggcagtaaatttgaattatttgatgaaaattctgctttgcacggcttaattaaataacactttaaagtaTGTTACTAAACGTATTATAGACTACATGAAGGTCTATTACTTACCCCAAAAACCTCGCTCGAGTAAATGTAACGGAGTAAAAGTAACTCGTTACTCCCCGCCTCTGAACTCCACCCACTCTCGCCTCCGCCAATGAAAACGCCGCATTTCTCGTCGGTTGCTGGATTAGACCCCGCCCACTCGCACAGCTCGACGCgcttgttttattgctttattgaaTATTCCTATAATAAAGAAACtgagcagaaacaaaacaactaacttccatttaacacatttgttttcactGACGGGGGTTGAATGGGGTCCAGAATACTAgttacttttttcttcttttttaaaaaattaattatttgactaaacattgcattaaagggttaattcCTCTCACTGCTCCGGGTTTTGTTGGGTGATTAACAGGagtgtcatttttgggtcaaccgTCCATTAAAGATGAGGGATGTATCTGAAAGATGAACATGTCTGAGTTTGTGCCTGCACCGAGAGTCACGTGATCAAaaaatttctgtttttctgcaaTAAAGTAagtaattaaacacaaaagacgAGGTGTAACCAGCATTAAATGATTTATGTAACTACCCaaccaaacaaatacatattagtAATAATGAAAACCTGCTGCTAGCTGGTCAAAGTAGTTCTCAAGAGCACGGCCCACTAAGTCGTTCCCTACTCCCTATATAGTGAACGTGCTGTGTAGGACATTTCTCGGCATCGGGCGCCATCTAGAGTTGTTTTCGTCAATGCAAAgcttattcattcatatttcagaTTGGTTTCATGAGTCAGAGTTGTTGCCTTTCCAGAACATAAAAGTAATACCAtacagtaaatatgtaaaatagcaaattaatgaaaattatagATAATATAATAGCCTGGCTTACAGTACGTCTCCTAAAGTGTGATGAACAATATTACTAACTGTAGCCTAATTTTCCAG
>XM_043247734.1
TCGCACGTCTTTAAGACGGCTCTTCTGCGTTCATTCACAAGCTCTCCAGCCATGAAGCTCAGAACTACATCTGTCCTGCCGCTCGCCTTCGTCGTCgtcaccatcatcatcctcaccaGCACCGAAGTGGATGGCATTCCCAGCTGTTGTGTGAGACTTTCAAAGAACATCCCTCGGAGCAAGCTGCGTTTGGTCACCAAGCACGAGATGCAGCTCAAGTCTGGAGTGTGTGACATCGACGCAGCGATATTGCACGTCGGAAAGCAGAGGATCTGTGTTCATCCTAAAGTCTTAAAACTTTTGAAGAGACTCAAGAAGCAACGCAAAGCCAAACGGATTCAAGCTAagattaaataaacatcatcatcTGGTTTATGAGGCACTCGCTGGattgcatgttttaatatttttttactataaactGTATATAATCTCTGAATACTCTGCTCTTTCATGCaataaaatgcctttttttaaaatgaaa

Function

NR:

description
C-C motif chemokine 28-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88755 True 1865 TUCP 0.39 6 565886 570973
XM_043247734.1 False 484 mRNA 0.44 3 568586 570967

Neighbor

gene id symbol gene type direction distance location
slc35d2 slc35d2,LOC107570982,LOC107570985 coding downstream 2672 558256 ~ 563214 (-)
fbxl17 fbxl17,LOC107704582,LOC107712428,LOC107661528,LOC107737136,LOC107570989 coding downstream 33498 362578 ~ 532388 (-)
efna5b efna5,efna5b,LOC107721028,LOC107709298,LOC107692204,LOC108265807,LOC107661535,LOC100702629 coding downstream 270616 202147 ~ 295270 (-)
LOC122350625 LOC107694826,LOC107583205,LOC107757045,LOC107747425,LOC107569528,LOC107675400 coding downstream 482858 7 ~ 83028 (-)
LOC122350794 LOC107661539,LOC107704586,LOC107726870,LOC107568101,LOC107581163 coding upstream 1610 572583 ~ 576178 (-)
ubox5 NA coding upstream 10056 581029 ~ 586701 (-)
lzts3b lzts3,LOC107569677,LOC107712591,LOC107661533 coding upstream 17825 588798 ~ 601844 (-)
sprb spr,LOC107661521,LOC107569671,LOC107726883,LOC107712600,LOC107568099 coding upstream 36477 607450 ~ 610914 (-)
fabp1b.1 fabp1b.1,LOC107573351,LOC107726869,LOC107704576,LOC107579792,LOC107712467,LOC107661522,LOC103043953 coding upstream 59381 630354 ~ 631145 (-)
G59739 NA non-coding downstream 14004 514767 ~ 551882 (-)
G59750 NA non-coding downstream 17975 545919 ~ 547911 (-)
G59688 NA non-coding downstream 329229 236074 ~ 236657 (-)
G59654 NA non-coding downstream 482033 83574 ~ 83853 (-)
G60016 NA non-coding upstream 44308 615281 ~ 617472 (-)
G60036 NA non-coding upstream 89462 660435 ~ 661098 (-)
G60003 NA non-coding upstream 152217 723190 ~ 725000 (-)
G60061 NA non-coding upstream 184651 755624 ~ 756643 (-)
G60079 NA non-coding upstream 245488 816461 ~ 820768 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other upstream 152172 723145 ~ 731844 (-)
csgalnact1b LOC107712620 other upstream 161820 732793 ~ 739372 (-)
G60098 NA other upstream 564428 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 569725 1140698 ~ 1159286 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 778198 1349171 ~ 1356953 (-)

Expression


Co-expression Network