G60061


Basic Information

Item Value
gene id G60061
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 755624 ~ 756643 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88859
cgcgtgtgtgtgtgtgtgtgtgagtgagcgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttctctctgaCCCTGCTGGTCGTGATCCGTGCAGTGGGACACCAGAGCGCTCACGGCTGGGAAAGTGATGCTGGACATGGCAGCGACGGCCCCGGCCGCCCACATCATCCtgtcaacaacacacacacacacacacacacacacacacggttacTAACGGCGCTCACAGCGGTCTCCATCACGACAGAACCTGACGCTCACCATGCTTCAGAGCCGAAGCCGTACCAGGCCAGCTGGAAGAGCTGGAAGCCCAGACCCAGCAGAACGGTGCTCTTATTCCCAATCTTCTTCATCAGGACGCTTAACAGCAGCGTCTGCACGGACGAAGAGTGTTCAAAGTATTAATAATGAAGAAATTAAGAGAAAAACATCACTACGAGACTAATAATCAAAatacagatgcttttattttttatattattattattattctttgctgttatatatatatataaataaaagaaccaGTGATATAGGAAATGTATTGCctgctttattttatatctaaacACAAAATCTTCTCAgtgtttctgtcttgttttctagtataaatatctaaatattgttGAATGAAGATGCATTTACTATTTAGAAGCAAAGCtgtcttaaaatattaagtcttgttttaaacatgtttttacttgaaaaaagcaaaacaaaccacCAATGAAGTGaacaaaacaatattgttttctgttttaaatgtgtgtgttttaaataagattatttagcttgttcgaagcaaaaactcattttgacttgtttttttctgaataattattaaaaagcattttttgctgTGTATGTCATGTCTTCATATTTatcctgtctctgtgtgtgtgtgtctgtctgtctgtgtgtg

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU88859 True 996 lncRNA 0.40 2 755624 756643

Neighbor

gene id symbol gene type direction distance location
spinb zgc:110697,LOC107726871,LOC107704578,LOC107577825 coding downstream 8288 743193 ~ 747336 (-)
rnf165b rnf165b,rnf165,LOC107726876,LOC107569673,LOC107712483,LOC107704592 coding downstream 30654 713366 ~ 724970 (-)
fabp1b.1 fabp1b.1,LOC107573351,LOC107726869,LOC107704576,LOC107579792,LOC107712467,LOC107661522,LOC103043953 coding downstream 124479 630354 ~ 631145 (-)
sprb spr,LOC107661521,LOC107569671,LOC107726883,LOC107712600,LOC107568099 coding downstream 144710 607450 ~ 610914 (-)
lzts3b lzts3,LOC107569677,LOC107712591,LOC107661533 coding downstream 153780 588798 ~ 601844 (-)
lrrc2 lrrc2,LOC107697579 coding upstream 3575 760218 ~ 770520 (-)
srp19 srp19,LOC107704595 coding upstream 27005 783648 ~ 786422 (-)
nudt12 nudt12 coding upstream 46380 803023 ~ 809151 (-)
prdm6 prdm6,LOC107713557,LOC107726219 coding upstream 128549 885192 ~ 914375 (-)
snx2 snx2,LOC107566389,LOC107713555,LOC107704573 coding upstream 191256 947899 ~ 961374 (-)
G60003 NA non-coding downstream 30624 723190 ~ 725000 (-)
G60036 NA non-coding downstream 94526 660435 ~ 661098 (-)
G60016 NA non-coding downstream 138152 615281 ~ 617472 (-)
G59739 NA non-coding downstream 203742 514767 ~ 551882 (-)
G59750 NA non-coding downstream 207713 545919 ~ 547911 (-)
G60079 NA non-coding upstream 59818 816461 ~ 820768 (-)
G60085 NA non-coding upstream 76084 832727 ~ 835131 (-)
G60080 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107726216,LOC107704598,LOC107573349 non-coding upstream 88776 845419 ~ 852159 (-)
G60112 NA non-coding upstream 119316 875959 ~ 876869 (-)
LOC122351117 NA non-coding upstream 167805 924448 ~ 946339 (-)
csgalnact1b LOC107712620 other downstream 16252 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 23780 723145 ~ 731844 (-)
ccl27a NA other downstream 184651 565886 ~ 570973 (-)
G60098 NA other upstream 378758 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 384055 1140698 ~ 1159286 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 592528 1349171 ~ 1356953 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 804903 1561546 ~ 1606609 (-)
G60220 NA other upstream 820162 1576805 ~ 1580616 (-)

Expression


Co-expression Network