G60085


Basic Information

Item Value
gene id G60085
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 832727 ~ 835131 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88887
ACAATTCATATGTTCTATTATAATCCTGTgggtccgctgcgttctcaatacctagaatatcaaaatcaacagcgggcggcagatccttttcctatctagcacctaaactctggaacaatctccctaactctgttcgggaggcagacacactctgtctgtttaaatctagattaaagacacatctttttaacttagcctacacataacacaccaacacacttttattattcaaatccgttaaaagatttaggctgcattacttagatttgctggaaccgggaacactactcataaaacacgatgtacttgtgacatcgtaaaaagaatggcatctacgctaatattagtctgtttctttcttaatctgtctctcagtttgtatccagactagatggtggatcagcacccagagattatgttcagagaccagaacacctagatgaggcccgtggacagatcaccggaaccagagacacacacacacacacgcacgcacacacacacacacgcacgcacacactaagtcatttacactacctgacacagctgcgtttaaaattgaactggaagttaagtgctgggcgtccggtcagaggagaactgaccccaactgagtctggtttctcccaaggtttttttttttctccattctgcaTGGATGGGGTTtcggttccttgccgctgtctcACTTAATTTCTAGAgattatcattgatttgattacagcatttaataacaacctgtcattatacatccctatcattgtattctcctgtctcatactgttcagtgctttgttacaacttgtattgttaaaagtgccatataaataaaagtgactgattaattgattgatatgtgcatttttcactcttttttaaatttaaaaaaaaaaatgcacattatcaATCTATTTGCGAAACAATTCACATGTGCTTTGTTGATATACAGCTACGCCTGGTAGAGCGTGATCACACAACAACAGAAACGAAGTGAAAGCGGACCTGGTTTCTTGTAGCTGACGTAGATGTAGAGCGCCAGGACGATGACGTTGGTGAGGAGCGCCGCCCACCAGTTGATGACGCGTGGAAGACGGAGAAATTGATCAAGGCGTAAGAGGCCAAGAAGAAGTTGGAAATGATGGGAGCGATGATGTTTAACTCAGCTGAAACACCAACACGCTGGGTTTTAGACACAGTCGCTGTCATCAGCGTATAAACCGGTCAGTCACATTGATTGGAGTGTACTTTACCGATCAGGATGAAGGCCAGGCCGATGATGAAGGTGAGGACGTAAGCGCGCAGGGGCTCTTTGTTCTTCCCGTATCCTTTGGCAAACACATGCATCCCTGGGTAGATTTTATCCTTACACAAGGCCTACAAAACCACACGCGTTAAACACATCCATCGGAAACCAAACAGACACCTTCGGCATTTCTCACACCATCACGGTTTACTTGCTTTAGTTTAGAAAATGGTGTTCAGCAGCCGCCATCTTGATAATGTCAGATAACTTTGTCTGTAATGAATTGTGTTCGATAGCTGTCCGCGGTTACGTTTAAGAACGCAATTACATAAAACCAGTTCAACTCAAACTATTGGTGGAAATAGTGGTGGAAAAAACGCTTGTgttagaaatgaaagaaaaacactttagcaaaacatgctgaAAACACAAAGTGTGAGGAAATCAGACAggataaatgtgtttttctcgTGCTATTCACGTGAATTATTTCTCATCAGACCACAGAGCCGTAGAAACCAGAGATTCAGCGTGCTTCTGTTCATCTTCACAAAGAGAAATCAACTGAAGCTGTGTGCGTTAAACCAGATCTCCTGCTCGGATTCTATGACCTCAAATAGTTCTGCCTTTTAAAACTTTATGGAATTGTCTAAATTTGGTCTGGTGTGAATGAAAACTGGCCAAACACCCAAGATTCAGCTCTGGACACCTGACGTCTGAACTACACGATACCGTTCAAGCAAAGTCAAAGGAGTTTTCGAGGAGGTGTGTTAGTGACCTGACCTGGAAGACTTTGGGAGCGCTGACCAGAGACGCCAGCGCCGATGAGAGCGTAGCGGAGAAGATCCCGGCCGTGATGAGCGGCCCGAAGCCGGACACTAAACTCATCACCTGAAACATCATGAACATCCTGCGTTACGACTAACACACCAGAAAAACAAAGGGTTACTTTTAACCCTCACTCGTCACATGAGGAGGTGAGACGCaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88887 True 2232 lncRNA 0.43 2 832727 835131

Neighbor

gene id symbol gene type direction distance location
nudt12 nudt12 coding downstream 23576 803023 ~ 809151 (-)
srp19 srp19,LOC107704595 coding downstream 46305 783648 ~ 786422 (-)
lrrc2 lrrc2,LOC107697579 coding downstream 62207 760218 ~ 770520 (-)
spinb zgc:110697,LOC107726871,LOC107704578,LOC107577825 coding downstream 85391 743193 ~ 747336 (-)
rnf165b rnf165b,rnf165,LOC107726876,LOC107569673,LOC107712483,LOC107704592 coding downstream 107757 713366 ~ 724970 (-)
prdm6 prdm6,LOC107713557,LOC107726219 coding upstream 50061 885192 ~ 914375 (-)
snx2 snx2,LOC107566389,LOC107713555,LOC107704573 coding upstream 112768 947899 ~ 961374 (-)
LOC122350969 sncaip,LOC107577394 coding upstream 131038 966169 ~ 980033 (-)
LOC122350790 lox,LOC107726222,LOC107704580 coding upstream 146503 981634 ~ 988560 (-)
prr16 LOC107713553 coding upstream 163517 998648 ~ 1004413 (-)
G60079 NA non-coding downstream 11959 816461 ~ 820768 (-)
G60061 NA non-coding downstream 76084 755624 ~ 756643 (-)
G60003 NA non-coding downstream 107727 723190 ~ 725000 (-)
G60036 NA non-coding downstream 171629 660435 ~ 661098 (-)
G60016 NA non-coding downstream 215255 615281 ~ 617472 (-)
G60080 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107726216,LOC107704598,LOC107573349 non-coding upstream 10288 845419 ~ 852159 (-)
G60112 NA non-coding upstream 40828 875959 ~ 876869 (-)
LOC122351117 NA non-coding upstream 89317 924448 ~ 946339 (-)
G60118 hsd17b4 non-coding upstream 176236 1011367 ~ 1011818 (-)
G60131 NA non-coding upstream 225962 1061093 ~ 1062238 (-)
csgalnact1b LOC107712620 other downstream 93355 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 100883 723145 ~ 731844 (-)
ccl27a NA other downstream 261754 565886 ~ 570973 (-)
G60098 NA other upstream 300270 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 305567 1140698 ~ 1159286 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 514040 1349171 ~ 1356953 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 726415 1561546 ~ 1606609 (-)
G60220 NA other upstream 741674 1576805 ~ 1580616 (-)

Expression


Co-expression Network