G60131


Basic Information

Item Value
gene id G60131
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1061093 ~ 1062238 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88950
gttttaataataataattcagtcaacacaaattattttacaagTAAAACATTTCTCTGCTTTTATAACGATTTCAGTTTTAGCTTTTGATGTTTTGTCGTATTTGAAGAAATCCTtacaatttttagttttagtgaacTAGCTTCAGAAAAAGAGGACATGTCCAGCAGAAGAGCAGGTGATGGACAGATAGCGCAGGAGGAAGGGCGCTCTGacctcctcatcctcttcctgGATGCTGCTGGAAAGCTCTTCAGGAAAAGGGTGTAGCAATGGACGGGAAATCCGGATCCTCCCTGTTTTTCCTTCCACAGCCATTGTTCCCAGAGCCTCGCTCACCTTCAGAGCTTGTGTTCTTCTGCTGAACGACGCAGGAGATGCGAGGAGACAGAAACCCCTGCGTGATCtgaaggcacacacacacacacacacactctcgctgTGAGCTGGTGCTCTGCCAACATCAGCCTGAGATCTGCTTCACAAAGCCATGTTCAAAGATCTGTGCTTTAAAGGCTGCAGATGGCGTGTTCGCACAACATGCGCTGGCCTACGCTTCTCCCTCTCCGTGCTTGTTTTTCCTCCTCCAGTATGATTTATGTGTCATTACGTATGATTGCGGTTCGCCGTGAATGGCAGAATGATTTTCCTCCGTCAGACATGAGAGAGCGTCCGGCTCCGAGCTGGAGCTGCTGGACCTGCAGGCCTGTAATTAGAGTCGTGGAGTCACGGAGCGAGCAGATACAATAACATCACAGAAACACTTCAGTCCCTCGGAGGAGCGTTTATACATCAGGAGCCCGAGGAGGTGGGTGGAGGAGCACGGAGTCCGGCGCGGCGCTGCTGCCCCCTGCTGCTGAGAAAACAGTCCTGacatcttcacacacacacacacacacacacacacacacacacacggtttttaatcatttcttttaaGCACTGCAGCGATCGCTCTAAAACACACGACTCTTTCTGAAGCACGTGACTCTGGAGCACGAAACCTGCCACAAGAGTCCTTTACACGGTTTACATCTtctgaaagatgaataaaaaatctTTCAGTTGATGTTTGACTCACTGACCTTCTTaggagaccagaacacctagatgaggaCAGATCAGGGGaaacagactcacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88950 True 1146 lncRNA 0.48 1 1061093 1062238

Neighbor

gene id symbol gene type direction distance location
dmxl1 dmxl1,LOC107571775,LOC107663590,LOC107704574 coding downstream 3166 1016890 ~ 1057927 (-)
prr16 LOC107713553 coding downstream 56680 998648 ~ 1004413 (-)
LOC122350790 lox,LOC107726222,LOC107704580 coding downstream 72533 981634 ~ 988560 (-)
LOC122350969 sncaip,LOC107577394 coding downstream 81060 966169 ~ 980033 (-)
snx2 snx2,LOC107566389,LOC107713555,LOC107704573 coding downstream 99719 947899 ~ 961374 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding upstream 98162 1160400 ~ 1168457 (-)
LOC122350094 NA coding upstream 182596 1244834 ~ 1248364 (-)
pym1 LOC107701384 coding upstream 187822 1250060 ~ 1252516 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding upstream 384762 1447000 ~ 1454530 (-)
dtx1 dtx1,LOC107692206,LOC107671029 coding upstream 432267 1494505 ~ 1523464 (-)
G60118 hsd17b4 non-coding downstream 49275 1011367 ~ 1011818 (-)
LOC122351117 NA non-coding downstream 114754 924448 ~ 946339 (-)
G60112 NA non-coding downstream 184224 875959 ~ 876869 (-)
G60080 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107726216,LOC107704598,LOC107573349 non-coding downstream 208934 845419 ~ 852159 (-)
G60085 NA non-coding downstream 225962 832727 ~ 835131 (-)
G60133 NA non-coding upstream 2159 1064397 ~ 1065200 (-)
G60153 NA non-coding upstream 58690 1120928 ~ 1122233 (-)
G60154 NA non-coding upstream 122070 1184308 ~ 1184649 (-)
G60170 NA non-coding upstream 152069 1214307 ~ 1218802 (-)
G60169 trim36,LOC107749435,LOC107573790 non-coding upstream 169838 1232076 ~ 1266809 (-)
csgalnact1b LOC107712620 other downstream 321721 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 329249 723145 ~ 731844 (-)
ccl27a NA other downstream 490120 565886 ~ 570973 (-)
G60098 NA other upstream 73163 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 78460 1140698 ~ 1159286 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 286933 1349171 ~ 1356953 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 499308 1561546 ~ 1606609 (-)
G60220 NA other upstream 514567 1576805 ~ 1580616 (-)

Expression


Co-expression Network