G60166 (LOC107701385,LOC107573793,LOC107749411,LOC107572966,LOC107728257,LOC107661167)


Basic Information

Item Value
gene id G60166
gene name LOC107701385,LOC107573793,LOC107749411,LOC107572966,LOC107728257,LOC107661167
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1264599 ~ 1266232 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU88994
TCAGCATTTGCTACCAATCcttctttatttataataaaggaAAAGCATGTCGGCCAATTAGCGAGAAAGACAATGAGTGTTTGCTAGTGCAGGAGCAGGCGACGGTATTTGATGTCTTTGGTCCAAACCGGAGCAGAAGGAACAAGACGGTCAAAGCGCATGACTGAAGGCACTTGATTACAGCGGTCTCAGatcatttggggaaaaaaaacaaaccagtccctctctctctctccatttgtGAGGAAGAACAGATGTTGCTTGATAACAGAGTTCAATAATAGAACTAATAAATCGCACTACATACATGGCCGGAGGCTACAAAACATTATACATATAGTTTACATATATACAGGATTGAGCTGAGAGGAGCGACGTGAAGCTAAAGAGAGACACGCATCCCGATCCAGACAGAAGAGCTCTCGTGGTCAAAACACATGCTTTCTGAGGAGGCTGACGGCGAGCGCAGCGTGAAATGAGAGTGTGAGGTATATCGTGAAGACTCTGCGACTCTGCCTTAGTGTTGATCATCCGAGAAGCGCTTGACCGTCTGAAAGGAGGAAGCCCACGAGCAAACACTCACCACAGGAACTACTGAGACTAACACTGAACGCTAATGTGACAGAAGAGAAGACAGAAGAGTGAAGAGCAGCTCGACAGATGTAAACTTGACTTTCTCTTCATCggacagctgtgtgtgtgtgtgtgcgcgtgtgtgtcaTGGGCCGTGCGTCCGCGGCTGCCTCTGTGGAAGCCCGTTGTGGGCGGGTCGATCCGAGCGGTAGCCTGAGGAGTGGGAGGAGCCTCTCGCACTATTGGTTGGCTGGGAGTCAAGGTCGCTTTGATAACGGTAGCCACTTCGGCCCGGGTTTCGCTCGGGGTGTGCGTTTCCGTTATATCGCTGAGTGCCCTGGTAGCCGTGAATGATACGCCTGTTGCCCTGGAAAATCTGTTGTGGGGCACGCTGGGGCGGCCTGTGTAAGCTGAGGCCTGGTGCTGGACCTCAGGGGGAGGCGGGGCTTTGGCAGGGGCAGAGCCAGTGACAGAAGAAGAGGTGGAGCTACAACGAGAACGGCTGGAGTAGCCCGTCTGAGGATGATACac

Function

NR:

description
PREDICTED: PH domain leucine-rich repeat-containing protein phosphatase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88994 True 1104 lncRNA 0.52 2 1264599 1266232

Neighbor

gene id symbol gene type direction distance location
pym1 LOC107701384 coding downstream 12083 1250060 ~ 1252516 (-)
LOC122350094 NA coding downstream 16235 1244834 ~ 1248364 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding downstream 96142 1160400 ~ 1168457 (-)
dmxl1 dmxl1,LOC107571775,LOC107663590,LOC107704574 coding downstream 206672 1016890 ~ 1057927 (-)
prr16 LOC107713553 coding downstream 260186 998648 ~ 1004413 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding upstream 180768 1447000 ~ 1454530 (-)
dtx1 dtx1,LOC107692206,LOC107671029 coding upstream 228273 1494505 ~ 1523464 (-)
LOC122350659 NA coding upstream 361421 1627653 ~ 1646362 (-)
LOC122349997 NA coding upstream 444126 1710358 ~ 1714221 (-)
LOC122350661 NA coding upstream 505750 1771982 ~ 1777474 (-)
G60170 NA non-coding downstream 45797 1214307 ~ 1218802 (-)
G60154 NA non-coding downstream 79950 1184308 ~ 1184649 (-)
G60153 NA non-coding downstream 142366 1120928 ~ 1122233 (-)
G60133 NA non-coding downstream 199399 1064397 ~ 1065200 (-)
G60131 NA non-coding downstream 202361 1061093 ~ 1062238 (-)
G60187 NA non-coding upstream 2566 1268798 ~ 1269384 (-)
G60188 NA non-coding upstream 12768 1279000 ~ 1279303 (-)
G60189 NA non-coding upstream 45653 1311885 ~ 1312144 (-)
G60192 NA non-coding upstream 85735 1351967 ~ 1449930 (-)
G60194 NA non-coding upstream 118187 1384419 ~ 1474712 (-)
commd10 commd10,LOC107728250,LOC107663591 other downstream 105313 1140698 ~ 1159286 (-)
G60098 NA other downstream 126447 1135401 ~ 1138152 (-)
csgalnact1b LOC107712620 other downstream 525227 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 532755 723145 ~ 731844 (-)
ccl27a NA other downstream 693626 565886 ~ 570973 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 82939 1349171 ~ 1356953 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 295314 1561546 ~ 1606609 (-)
G60220 NA other upstream 310573 1576805 ~ 1580616 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other upstream 466632 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other upstream 482830 1749062 ~ 1762549 (-)

Expression


Co-expression Network