G60199


Basic Information

Item Value
gene id G60199
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1457970 ~ 1514295 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89043
TCTGttctttctTatctattttattgtatatagcGTCAATTCCGTTAGGTACTATCTAATACAAACACTACTAGTacctattaaataaatactagtaCTTCAGTAGTGACTAGTAACTATTCTGTTCtcacatttcaaatgatttctattcACTTCAACGGGATCAGACGATATCTACTCTGTTCTTTCTTATCTCCTACAGATGTCGCTAgtacatattttcatatactAGTAGTTTTTTATAGGGTACTAGTACTTATTAAACTCTAGTCTGTTAGTACTAAAGTTCTGTACGGTTTCGTGTTATGACTTGTCAGAATGACCTCTGGCaagccattttaacatttagtcCTCAAAACCTACTAATATCTATTTTCATGCTACTAGTACTTACTGTTACCTGATGGAAAATATACTAgtagctaaaaaaatatttattcattagctACGGTGCTTATTTGTAAGTAACTGTACACTAGTACTCCTTCATTAGATATTAGCACTTGTTTCATAACTATTCTgttgtttctagttttttttttttcattaaatcccATAGGAATCTGTCATTCATATGTTAACTCTTCTGGTCTGTTTAGTCTAGTATATACATATCAATTGTGactagtatatatttataattcttCAGGTACTAGTTCTTATTTTTTAGGTAcctattacatatatatactactacttATTATTAGATGGTAGTATTAGTTATAATATAAGACTAGTATAATAAGAGCTGTTGCTAGTATTGATTACAAAAGATACTAGTGTCTAATAAAGTATTACTAATACCTAATGAATAGAGACTGGTATCTATTGAAAGGGTACTagtacataaacaaacacaatagtatttaataatactttaatgaaTACTTAATACTAATCTAATACATACTATACACATACTATGCATTAGTATCTAATACATAAGAACTAGTAGCTAATGAAAAAAGTTGCTTAATGGAATAAGTACTAGTAGCAGTGAAATAGATATTAGTATGTTTTACTAGTATAGATACTAGTActagtatgttttatttatttatgattaatttaaaacgCTTTGCGTTATAGTTAGTAATATCTAATTGGtgagtatttaataaataagaagCAGTATCAAATGAATAAGAACtagtatgtttaaaataaaaaagtcctAGTAACTAAGGAATAAGTACTATTAGCTAATGAAAGAGATACTAGCTAAAAAAGGTACTAGTAGCATGAAAATAGATACGAGTATGTTTTAtagattaaatgtgaaaacgcttTATAGTATCTACTTGAGTACCAGTATCTGATGAATAAGATTTAGTACCAAATGAGTAGATACTGGATATCAGGAATAGAAAAAAGTATTAGCGTGAGAACATATCTTTTAaggattaaatgttaaaatggcttgccataatgcactaaaaaaaaagaggttgtTTCAACCTAAAATCCTTTGTTAACCCGCTGACTTAAATTCTTTTTGTTtagtcaacttgaaattttaagttacttaatgttaatttaagtaacaactggaatattttagttgaattTGAAGgattttaagttgaaacaactatgTTTTCGAGAGCGTAGAAGCGTGTCTGTGTTTATTGTAGATTTTGGCTGGGGTTGTGAAACCCAGCGGAAGGTGAGAGCGTCACGTGGAGACGGCGGATCAGTCAGGTGATTTCAGACCATATGGCACCTAAAAAGAGCCAGATCCGTCATCCCAGATTCATTAGCGttttataatgaaatgcatttgaccGAACTGAAATAGCAGGATCGAGAAGAGCTGTTTCCCAGAAGGAAATGCGCTTTCTGAGGAGAATAATTTTGTAGCTGGCACACATTTAAGTGTGTCACAACCTCAAACCTGCTCTTCTCTGAATATCTTTctgaatacatacatatatatatatgtagaggATGTTGGTAACTGGTGAAGTGGTTGATGTTGATGTGCGTTTCCGGGGGCAGGTTTTTCacgagtttttttttgtttgtttgttttggtcatGCGAACCATTGAAGTCGAAGAAAAGCGCATGGACTTGTTCCTCATGTCATAGACTCTTCCAGGCAATAGAATTAACATGTACATTAAGAGAATCGATGTCAAATGACAAAGTGTCGTTTGATGAAACAATATAAGGGCTTTTATGATACGTGTCTTAATGAATCTGTTATGATCTTGTTGCATGTCTGTGTTTCCTGTGAAATAAACCCTCTCCTTCAGCAAAGGGAGACTGATTTGACTTTCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO:

id name namespace
GO:1902562 H4 histone acetyltransferase complex cellular_component
GO:0044428 obsolete nuclear part cellular_component
GO:0035267 NuA4 histone acetyltransferase complex cellular_component
GO:0043189 H4/H2A histone acetyltransferase complex cellular_component
GO:0032777 Piccolo NuA4 histone acetyltransferase complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89043 True 2341 lncRNA 0.31 4 1457970 1514295

Neighbor

gene id symbol gene type direction distance location
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding downstream 3440 1447000 ~ 1454530 (-)
pym1 LOC107701384 coding downstream 205454 1250060 ~ 1252516 (-)
LOC122350094 NA coding downstream 209606 1244834 ~ 1248364 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding downstream 289513 1160400 ~ 1168457 (-)
dmxl1 dmxl1,LOC107571775,LOC107663590,LOC107704574 coding downstream 400043 1016890 ~ 1057927 (-)
LOC122350659 NA coding upstream 113358 1627653 ~ 1646362 (-)
LOC122349997 NA coding upstream 196063 1710358 ~ 1714221 (-)
LOC122350661 NA coding upstream 257687 1771982 ~ 1777474 (-)
si:dkey-178e17.3 LOC107754395,LOC107671045,LOC107657210,LOC107722861 coding upstream 322828 1837123 ~ 1852539 (-)
si:dkey-178e17.1 slc25a1,LOC107754397,LOC107670994,LOC107657208,LOC107722854,LOC108412497 coding upstream 343625 1857920 ~ 1878899 (-)
G60192 NA non-coding downstream 8040 1351967 ~ 1449930 (-)
G60189 NA non-coding downstream 145826 1311885 ~ 1312144 (-)
G60188 NA non-coding downstream 178667 1279000 ~ 1279303 (-)
G60187 NA non-coding downstream 188586 1268798 ~ 1269384 (-)
G60169 trim36,LOC107749435,LOC107573790 non-coding downstream 191161 1232076 ~ 1266809 (-)
G60217 NA non-coding upstream 28151 1542446 ~ 1544129 (-)
LOC122350073 NA non-coding upstream 136625 1650920 ~ 1655010 (-)
LOC122350074 NA non-coding upstream 143443 1657738 ~ 1659992 (-)
G60209 NA non-coding upstream 147194 1661489 ~ 1671766 (-)
LOC122350072 NA non-coding upstream 150007 1664302 ~ 1666989 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other downstream 101017 1349171 ~ 1356953 (-)
commd10 commd10,LOC107728250,LOC107663591 other downstream 298684 1140698 ~ 1159286 (-)
G60098 NA other downstream 319818 1135401 ~ 1138152 (-)
csgalnact1b LOC107712620 other downstream 718598 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 726126 723145 ~ 731844 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 47251 1561546 ~ 1606609 (-)
G60220 NA other upstream 62510 1576805 ~ 1580616 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other upstream 218569 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other upstream 234767 1749062 ~ 1762549 (-)
c8h22orf39 si:ch211-51h9.6,LOC107699642,LOC107560060,LOC107670995,LOC107753003,LOC107754424,LOC107559584 other upstream 545099 2059394 ~ 2061481 (-)

Expression


Co-expression Network