G60217


Basic Information

Item Value
gene id G60217
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1542446 ~ 1544129 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89086
TGATGTTGAGCGagtggaagaggaggagagagaggagaagaggaggactGATGCTGATTCTCTCTCTGGAGAAGAAATCTCTCACTGACCTGAAACTGAAGATCCATCGTCTGGAAGATCGTCCAGCTTCACGttcttCAATTAACtgaaatccatccatccattcgcTACCGCTTAttcggggccgggtcgcgggggcaacagtctaagaagggacgcccagacttccctctttCTCCAGACACTTCCTTctgggggaacaccgaggccctccctatctctaagggagcacccagccaccctacggaggaaactcatttcagccgcttgtatccgggatctcatcctttcggtcatgaacCAAAGCTCACGACCAAAGCTGAGAGTAGGAAAGAAGAttgaccggtaaatcgagagcttcgccttgtggctcagctccttcttcaccatgacagaccggTACAGCGACTGCTTTACTGCTGAAGCTGCACTGATTAGTCTGCTGATCTCTCGTTCCATTctcccctcactcgtgaacaagaccccaagatactgaaactcctccacctgaggcaggagctcccacaccaacctgaagggggcaagccacccttgtccgactgagaaccatggcctcagatttagaggtgctgattctcatcccagccgcttcagcGTCAAAGCTCTGCTGGAGGCTGGGAACGTCATGGTGGTTCTGGTGGTGATCCGCAGCAAACACATGATGACCGCCACCAACTGCTATTTATATGTCCCCCTTATCAGATAAACCCAATACACCCAGGTCTTGTAATCTCTACCAACGAGCTGATGGGTGGAATCAAGTGCTTTTAATAAGGGGACACATAGATGTACAGGGCCGGGGTGcctccaggacaggtttgaaaaccactcttATAAAATACAGGAAACAGCAGCTCAGACCACCATCATGTATCATTCTTTTCAGTCTCTAATTTACTTTCATAAGATTCAAACATCTAGCAAAGCTGCATATTTTAGATCAGAGGTCAtcaaaaaatatacaatgtacTGTTTAACATTCATCGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89086 True 1070 lncRNA 0.49 2 1542446 1544129

Neighbor

gene id symbol gene type direction distance location
dtx1 dtx1,LOC107692206,LOC107671029 coding downstream 18982 1494505 ~ 1523464 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding downstream 87916 1447000 ~ 1454530 (-)
pym1 LOC107701384 coding downstream 289930 1250060 ~ 1252516 (-)
LOC122350094 NA coding downstream 294082 1244834 ~ 1248364 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding downstream 373989 1160400 ~ 1168457 (-)
LOC122350659 NA coding upstream 83524 1627653 ~ 1646362 (-)
LOC122349997 NA coding upstream 166229 1710358 ~ 1714221 (-)
LOC122350661 NA coding upstream 227853 1771982 ~ 1777474 (-)
si:dkey-178e17.3 LOC107754395,LOC107671045,LOC107657210,LOC107722861 coding upstream 292994 1837123 ~ 1852539 (-)
si:dkey-178e17.1 slc25a1,LOC107754397,LOC107670994,LOC107657208,LOC107722854,LOC108412497 coding upstream 313791 1857920 ~ 1878899 (-)
G60199 NA non-coding downstream 28151 1457970 ~ 1514295 (-)
G60198 NA non-coding downstream 49286 1399728 ~ 1493160 (-)
G60194 NA non-coding downstream 67734 1384419 ~ 1474712 (-)
G60192 NA non-coding downstream 92516 1351967 ~ 1449930 (-)
G60189 NA non-coding downstream 230302 1311885 ~ 1312144 (-)
LOC122350073 NA non-coding upstream 106791 1650920 ~ 1655010 (-)
LOC122350074 NA non-coding upstream 113609 1657738 ~ 1659992 (-)
G60209 NA non-coding upstream 117360 1661489 ~ 1671766 (-)
LOC122350072 NA non-coding upstream 120173 1664302 ~ 1666989 (-)
G60214 NA non-coding upstream 129387 1673516 ~ 1684040 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other downstream 185493 1349171 ~ 1356953 (-)
commd10 commd10,LOC107728250,LOC107663591 other downstream 383160 1140698 ~ 1159286 (-)
G60098 NA other downstream 404294 1135401 ~ 1138152 (-)
csgalnact1b LOC107712620 other downstream 803074 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 810602 723145 ~ 731844 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 17417 1561546 ~ 1606609 (-)
G60220 NA other upstream 32676 1576805 ~ 1580616 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other upstream 188735 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other upstream 204933 1749062 ~ 1762549 (-)
c8h22orf39 si:ch211-51h9.6,LOC107699642,LOC107560060,LOC107670995,LOC107753003,LOC107754424,LOC107559584 other upstream 515265 2059394 ~ 2061481 (-)

Expression


Co-expression Network