LOC122350657 (pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589)


Basic Information

Item Value
gene id LOC122350657
gene name pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1561546 ~ 1606609 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89094
CGCTTCCAGGTGATGTTCAGATACTTTGAGGACAAGGCCATCCAGAAAGACAAATCAGGCATGATGCAGTGCGTGATTTGTGTAGGTGACAAAGTCTTTGAGGTTTTCCTGCAGATGATGGCTGAGAAACCCAAGACTAAAGAGCATGAGGAGGAGCTGGAGCGCCACGCTCAGTTCCTATTGGTCAACTTTAACCACACCCACAAGAGGATCCGACGGGTGGCAGATAAATACCTCTCAGGACTCGCCGAAACGTACCACAATCCACACTTTCAATAGAAGGCTTATTAATAAGCATCACTTATGATAACCTGAACAATTTCGCGCAGTATTTATAGATTCCTTGTTCTTTTTGCGCTGTCTGTTTCTTATTAGAGTATAGAGTCGTACACGAAGACTAAAgggttttaaaaacacaaatgcagcaaaaatacatatgaatatgTTGCCAACAAATGATCTTTAGTGGAAACCTGCAGGGAGAGCTTAAAGTAAAAGCTCTGTGGTTTAGTGTTTGAAAGACAGCTGTTCtgtaaaataatgtcattttatttttatatattattattgctataaaatatttctttattgaaaatgtcatttcacaACATTATCATTTTACTaccaataatataattttaatctaTCATTTGTAGTATTATTACAGTAACACTATTGCTATAGTGAAGTATTTCTTTATAGgtttttttggtaatttaatGATGCaatgatgatgatttttttttaattaaattctataaaacttctataacatattttttgtaatccacttttattattattattattattattattattattattattattgctatcattgtac
>XM_043247339.1
ATGGTACGAGGAGTGTGTGAAATCGCCACTAAATCCCCGCTGCTCACGTTCCCGAGCGGAGAACCGCTGCGCTCAGAACTCCAGTACAACTCTGCTCTGAAGAGCGACACGGTTACGCCCGCGGAGTTAAGTGAACTGCGCAGCACCATCATTAATTTGTTGGATCCGTCGCCTGAAGCTGCTGCCCTCATCAATAAACTGGACTTCGCCATGTGCACCTACCTGCTGTCTGTGTACGGCTGGGTACATGAGGTTGAAGCGCGCTTTCTGACTCTCTCGTTGTGGGGGTTTCATGTGATTTTGCTCATCTCTCTCCGTGTTAGGATGCTGCACTCCAATGATGCTGGCTTCCAGGTGATGTTCAGATACTTTGAGGACAAGGCCATCCAGAAAGACAAATCAGGCATGATGCAGTGCGTGATTTGTGTAGGTGACAAAGTCTTTGAGGTTTTCCTGCAGATGATGGCTGAGAAACCCAAGACTAAAGAGCATGAGGAGGAGCTGGAGCGCCACGCTCAGTTCCTATTGGTCAACTTTAACCACACCCACAAGAGGATCCGACGGGTGGCAGATAAATACCTCTCAGGACTCGCCGAAACGTTTCCTCATCTTCTGTGGAGTGGAAGGGTTTTGAAGACTATGTTGGACATCCTGCAGACTCTGTCTCTGTCCCTGAGCGCTGACATCCACAAAGACCAGCCCGTACTCGACATTCCCGACACTCCGTACAGAATCACGGTCCCGGACACGCATGAGGCGAGGGAGAGCATCGTGAAGGACTTTGCCGCCCGCTGTGGAGAGATCTTGAAGGAGGCCATGAAATGGGCTTCTGTCACCAAATCTCATCTCCAGgagTATCTGAACAAGCATCAGATCTGGCTGTCAGGTTTGTCTCAGCACACGGGTTTGGCGATGGCTACCGAGAGCATTCTCAGCTTCGCGGGATACAACCGTCAAAGCACCACACTGgggGCAGCTTTTCCTCAGGTTACCCAGCTCACGGAGCGGCCCACCTGCGTGAAGAAGGACTACTCCAACTTCATGGCATCCCTTAACCTGCGTAACCGCTACACTGGAGAGgtCGCTGGGATGCTGCAGTTTGCTGAAGTGACACACAGCGAGTCGAACCTCAGCAAACTGATGGTTTCTCAAATGAGTGACGCTCTGGACGCCAAAGACTCGGACGCATTCACACAGAACATGTTCAAGATGACGGCTCTGCTCATTAGCACTAAAGACTGGGACCTTCAGCTGCTGCATCACCTCTGCTGGTCTCCTCTGAAGATGTTCACGGAGCAGGGCATGGAGACGGCCATCGCCTGCTGGGAGTGGCTGCTCGCGCGCGCGCGTAATGGAGCCGAAGTCCAGTTCATGCGTGAGATGGCGGGCGCCTGGCAGATGACCGTCGAGCTGAAGATGGGCTTGTTCTCGGAGACCGAGTCAGAAGCCGACCCTTTAGCTGCTTCTGAAGAGAGTCAGCCGCTGCCTCGCGTCCCCAACGTCACGCCGCACTCGCTCTGGATCGAGTGTTTTCTAGTGCAGAGATTCGAAATTGCAAAATACTGCAGTGCGGATCAGGTGGAGATCTTcaccggtgtcctgcagagggCGCTGTCTCTCAGCGTCGGTGGACCCAAGAGCTGCCTGAACCGCCACGTAGCTGCCATAGGACCCCGATTCAGgctgCTGACTCTCGGTCTCACTCTTCTTCATGCCGATGTAGTCACTAACGCCACAATCCGTAACGTCCTGAGAGAGAAGATCTACTCTACTGCCTTTGATTACTTCAGcgttGCTCCACGGTTCCCCACGCAGCCGGAGAAACGCCTGCGTGAAGACATCAGCATCATGATCAAGTTCTACGCGTGTCTGCTGTCGGATAAGAAATATCTCACAGCTACTCAGCTCGTCCCTCCAGATCCTCAGGACGTGTCGGTGAACAGTCTGTCTGTGATGGCGGTGGCGGACTCCCGGAGCAGTCTGGACGCGGCGGTGGGCTCCAGACAGCAGGCCACACAGGGCTGGATCAACACATACCCTCTGTCCAGCGGAGTCTCCACGCTCTCCAAGAAATCAGgTTTGTCAAAGAAGACGAACAGAGGAACTCAGCTGCACAAATACTTCATGAAGCGCAGGACGCTGCTGCTGGCCCTGCTGGCGAGCGAGGTGGAGCGTCTGACCACGTGGTACAATCCTCTGGGCAGCCAGGAGCTGCAGATCTCCGCCGAGCAGTCTGTGGAGACCAGCATCACTAACTGGAGGTCCAAGTACATCAGCCTGACCGAGAAGCAGTGGAAGGACAACGTCAATCTAGCGTGGAGCATCTCTCCGTACCTCGCCCTACAGCTGCCGGCCAGGTTCAAGAACACAGAGGCCATTTTCTCAGAAGTGACCCGGCTGGTTCGTCTGGACCCCGGGGCCGTCAGTGACGTTCCTGAGGCTGTGAAGTTTCTGGTGACGTGGCACACGATCGACGCTGATTCTCCGGAGCTGAGTCATATCTTGTGCTGGGCTCCGGCTGATCCTCCCACAGGACTCTCGTACTTCTCCAGCATGTATCCTCCGCATCCGCTGACCGCTCAGTACGCCGTCAAAGTCCTGCGCTCCTTCCCTCCCGATGCTATTCTGTTTTACATTCCACAAATTGTTCAGGCCCTCCGTTATGATAagATGGGGTACGTGAGAGAGTACATCCTCTGGGCAGCACAGAAATCTCAGCTTCTGGCACATCAGTTCATCTGGAACATGAAGACCAACATCTACACAGATGAGGAGGGACACCAGAAAGACCCTGATATCGGGGATCTTCTGGAGCAGCTGGTTGAGGAGATCATCGGTTCTCTCTCAGGTCCAGCTAAAGACTTCTACCAGCGCGAGTTTGACTTCTTCAACAAGATCACCAACGTCTCAGCCATTATAAAGCCGATTCCTAAAGGAGACGAGCGGAAGAGAGCGTGTCTGAGAGCTCTGTCTGATATCAAAGTCCAGCCAGGCTGTTATCTGCCCAGTAACCCTGAAGCTATAGTGCTGGACATCGATTATAAATCAGGAACACCAATGCAGAGCGCTGCCAAAGCACCGTATCTGGCCAAATTCAAGGTGAAACGCTGTGGAGTGAGTGAACTGGAGAAAGAGGgcTTGCTGTGTCGCTCGGACTCGCTGGATGAGGCTCAGAGCGGAGAAGAAGCACAGAAGATCTGctggcaggcggccatctttaAAGTCGGAGACGACTGCAGACAGGATATGTTGGCGTTGCAGATCATCGGTCtgtttaagaatatttttcagCTGGTGGGACTCGacctgtttgtttttccatatAGAGTAGTAGCTACGGCACCAGGGTGTGGCGTCATCGAGTGCATCCCAGACTGTAAGTCCAGAGATCAGCTCGGACGACAGACAGACTTCGGGATGTACGATTATTTCCGGAACCAGTACGGAGACGAATCTACTCTGGCCTTCCAGAAGGCGAGGTATAACTTCATCCGTAGCATGGCTGCATACAGTCTGCTGCTCTTCCTGCTGCAGATCAAGGACAGACACAACGGAAACATCATGCTGGACAGACAGGGACATCTCATCCATATCGatttCGGCTTCATGTTTGAGAGTTCTCCGGGTGGGAATCTGGGCTGGGAGCCGGACATCAAACTGACTGATGAGATGGTGATGATCATGGGCGGGAAGATGGAGGCCACACCCTTCAAGTGGTTCATGGAGATGTGTGTGCGTGGATACCTAGCTGTcagGCCGTATATGGATGCTGTGGTTGCCTTGGTAACGCTGATGCTggatacaggactgccctgcttCCGCGGTCAGACCATCAAACTGCTCAAGCAGCGTTTTAACCCTGGAGTGAGTGAGAAGGAAGCAGCAGCTTTTATCATCAAAGTCATTCAGAACTGCTTCTTGAGCAGCAggagCAAAACGTATGACATGATCCAGTATTATCAGAACCAGATCCCGTACTGAAGGCCAGagaaacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttcagcctCAGTGACGGAGCACATTATTGATGGGAAGCTTCTCTAAGCCATCAGTCAGACGCGTCACAAAACCTCTCAAAGAGTATTAAACTGGAAGGATACGAAGGATTTCTACATGCTGCCATTTGACTTCAACATCTCCCAGTCATTAAAAAGTACTAGAAACACTCAGTGCACAAACAAACTCAGACCATCACGTATCCCACCCAACCAAATCAGATCAACATCCAACAAAATCTGACAATACTGATACATTGCTCCAACAGCATTTGTAACAAATCACAGTTCACAACATACAAGCACAATATGACTCATTCAATATATGTGTGTCCCTTTATCATAAGTTATGCTATGAATTCCCCCTAAGATCCCAGGCTGTATAAAACATCCTCAGTCCAGCCCTGTTATACTAACCAGTGTTTAGTTCTTGAAACCTTCCCATAAGTACCTTTAGTAAGTTTGGctacatatgtatttttaagaacatGGAGACCTCTTGTGGCTGGATGAAGTTACTGCATCAAAACACTGCTCCTCCTGTAGTGTGCAGCTGTAAGTGAACACTGTAAGTAAAGAGATCACTTGCTCATCA

Function

symbol description
pi4kab Predicted to enable 1-phosphatidylinositol 4-kinase activity. Predicted to be involved in phosphatidylinositol phosphate biosynthetic process and phosphatidylinositol-mediated signaling. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human PI4KA (phosphatidylinositol 4-kinase alpha).
pi4ka Enables kinase activity. Involved in multi-organism membrane organization; viral RNA genome replication; and viral replication complex formation and maintenance. Acts upstream of or within phosphorylation. Located in cytoplasm and plasma membrane.

NR:

description
PREDICTED: phosphatidylinositol 4-kinase alpha-like

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0048015 phosphatidylinositol-mediated signaling biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00888 PI4KA; phosphatidylinositol 4-kinase A

RNA

RNA id representative length rna type GC content exon number start site end site
TU89094 False 847 TUCP 0.33 3 1601521 1605113
XM_043247339.1 True 4632 mRNA 0.52 43 1561546 1606609

Neighbor

gene id symbol gene type direction distance location
dtx1 dtx1,LOC107692206,LOC107671029 coding downstream 38082 1494505 ~ 1523464 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding downstream 107016 1447000 ~ 1454530 (-)
pym1 LOC107701384 coding downstream 309030 1250060 ~ 1252516 (-)
LOC122350094 NA coding downstream 313182 1244834 ~ 1248364 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding downstream 393089 1160400 ~ 1168457 (-)
LOC122350659 NA coding upstream 21044 1627653 ~ 1646362 (-)
LOC122349997 NA coding upstream 103749 1710358 ~ 1714221 (-)
LOC122350661 NA coding upstream 165373 1771982 ~ 1777474 (-)
si:dkey-178e17.3 LOC107754395,LOC107671045,LOC107657210,LOC107722861 coding upstream 230514 1837123 ~ 1852539 (-)
si:dkey-178e17.1 slc25a1,LOC107754397,LOC107670994,LOC107657208,LOC107722854,LOC108412497 coding upstream 251311 1857920 ~ 1878899 (-)
G60217 NA non-coding downstream 17417 1542446 ~ 1544129 (-)
G60199 NA non-coding downstream 47251 1457970 ~ 1514295 (-)
G60198 NA non-coding downstream 68386 1399728 ~ 1493160 (-)
G60194 NA non-coding downstream 86834 1384419 ~ 1474712 (-)
G60192 NA non-coding downstream 111616 1351967 ~ 1449930 (-)
LOC122350073 NA non-coding upstream 44311 1650920 ~ 1655010 (-)
LOC122350074 NA non-coding upstream 51129 1657738 ~ 1659992 (-)
G60209 NA non-coding upstream 54880 1661489 ~ 1671766 (-)
LOC122350072 NA non-coding upstream 57693 1664302 ~ 1666989 (-)
G60214 NA non-coding upstream 66907 1673516 ~ 1684040 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other downstream 204593 1349171 ~ 1356953 (-)
commd10 commd10,LOC107728250,LOC107663591 other downstream 402260 1140698 ~ 1159286 (-)
G60098 NA other downstream 423394 1135401 ~ 1138152 (-)
csgalnact1b LOC107712620 other downstream 822174 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 829702 723145 ~ 731844 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other upstream 126255 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other upstream 142453 1749062 ~ 1762549 (-)
c8h22orf39 si:ch211-51h9.6,LOC107699642,LOC107560060,LOC107670995,LOC107753003,LOC107754424,LOC107559584 other upstream 452785 2059394 ~ 2061481 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other upstream 524760 2131369 ~ 2162003 (-)
G60564 pxnb other upstream 854322 2460931 ~ 2464371 (-)

Expression


Co-expression Network