G60248


Basic Information

Item Value
gene id G60248
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1885248 ~ 1886439 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89128
aaaaaattataaaaacaacaaaagcgcTAAAACTTTGactgatgttaaaataaaaatataaaaattaattgatttacaTTACAAGCTCCCTACTTCCATATAAAAATCAGCATCTGcagaaaattatacattttgtctCTGAATATAAATGCTTATATATTCTCACTACAAGACGCTCAGCATTAaacttgtgcatttttatttaaattttattactaatattattttgtgattttgtcTAAAAGTTCAGCGTAtgctctataaaaaaaaaataaaataaaaataataataattcctgtTAGGCGTTGCATGAGTTTAATGTAAGAGTGTTTTGCCGCCATCTGCAGGTCAAACTATGAATATTAAAGAACAGCAGTTGCCTTGGTAACGGTCATAAACCATTACATATATCCCGACTGGCCCCTTCACATcttcttataataataattagcttCCTTTTCTGTTCTCGAGGATGCACTCacgcaaaacaaacaaacaggcttATTACAGCTACAGAGCAGTGCACTGTGGGTAATCAAGCAGGCTACGGAGAAACCTCTTCTGATTGTACTCTACATGCGCTAACGTCTAAAACAGAGACGGACAGACCTTGACCCGCCGGGAAAAGTCGTCCACCTGCGGAGGACCAAACTCAGGTCAGCATTCAGCAACATCTACTCTATCGGATCAGATCTTTTCATTTATGCAATCAGAGCAATGTTTATCAGGCACTAAAACACACAGGTGCACTGTAGTtacgactttcatttttttaaaatagattagcAAATGCcgaaattaacatttaataagattaataaattaaaaaaaggttttttgcatgaataaataaattaattgtcagtaaattaaatagctttttccataacaattttcatttctgtttacaCATTAATAAcatgccaaataaataaaatatataattgaataaaaagttacaggaaagcaatacatttaaaaatcgattaaaattaaaaaaaaaattgcgtaaataaaataacatcaataattgataaattaataatgacagaatgtttgtttcaaggtaaaaaaaaaaaaggatttaatacatttaaaaaaattaaatttaaataattgttcattata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89128 True 1128 lncRNA 0.29 2 1885248 1886439

Neighbor

gene id symbol gene type direction distance location
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding upstream 57837 1822636 ~ 1827411 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding upstream 77846 1802695 ~ 1807402 (+)
LOC122350660 NA coding upstream 235630 1648478 ~ 1649618 (+)
LOC122351062 NA coding upstream 324881 1559120 ~ 1560367 (+)
LOC122350265 rasal1 coding upstream 403694 1456231 ~ 1481554 (+)
LOC122350512 NA coding downstream 50322 1936761 ~ 1946949 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding downstream 80144 1966583 ~ 1995859 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 119645 2006084 ~ 2014684 (+)
mrpl40 LOC107753002,LOC107559600,LOC107699643,LOC107560058,LOC107754402,LOC107671004 coding downstream 168892 2055331 ~ 2058725 (+)
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding downstream 175102 2061541 ~ 2069288 (+)
G59974 NA non-coding upstream 59412 1755120 ~ 1825836 (+)
G59982 NA non-coding upstream 83162 1800305 ~ 1802086 (+)
G59953 NA non-coding upstream 86078 1601348 ~ 1799170 (+)
G59952 NA non-coding upstream 92781 1595712 ~ 1792467 (+)
G59969 NA non-coding upstream 102711 1729067 ~ 1782537 (+)
G60258 NA non-coding downstream 22089 1908528 ~ 1911167 (+)
G60265 NA non-coding downstream 60709 1947148 ~ 1950296 (+)
G60269 NA non-coding downstream 66354 1952793 ~ 1953126 (+)
G60281 vdac3,LOC107671013,LOC107559564 non-coding downstream 80681 1967120 ~ 1999468 (+)
G60288 NA non-coding downstream 114322 2000761 ~ 2003003 (+)
pggt1b pggt1b other upstream 666444 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 1033244 842077 ~ 852004 (+)
G59807 NA other upstream 1080409 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1334561 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 29021 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 128420 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 144385 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 151260 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1962175 3848614 ~ 3850557 (+)

Expression


Co-expression Network