LOC122350140


Basic Information

Item Value
gene id LOC122350140
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2024562 ~ 2027328 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89214
GAAAGAGAGGTCGGTTCGTGATAAGAACAGGTGAAGCTAGTTACGCATTTTACATTCGTTTTGTTCGAACACAGCTTGAGAGACACAGACACTGAGATACTGAGTGAATTCGGCACTAAAAAAGATCAATGGCGAAAACATCAATTAATATACAGCAAGCGGACATGAGTCAAGAGCTGCAGCGGGAGGCTCTTCAGTGCGCTCTTCTGGCTGTGAACATGTACGAAAGCCACTCGGACATCGCTACGTACATCGCAAAGGAATTCGACAGAAGGGTCCAGCCCAAATGgcactgcattgtgggaaacTGTGGTTACTTTGTGAGACACAAGGATAACTGTTATATTTGCTTTGAAGTTGGAAATAAACGAATAACGCTTTTCAGGACTGACTGATCAACAGTTCAAACATTTGGTTAAGGAATTTCAGGTCTGCTGTTTTAGTTGCGGTGGcactttatgttttaatttgcatatgaataaacattttaattaccatAATTCGAGTTTTTTGGAATGGCATGGTTATAAACGACTGATATGTTCCGGACCTTTGTGAGATCCCGTCACTTACCAGGTTTTGATGTAAGAGTAAAAATATCTGGTTTTACTTGTTCTGGAAATCGtacaagtatttttattttcagatcgTCGCACAGAAAATGAGATGCTGATTTCGCATGACGAGTGTAAAACGGCAATAAATCGTGccacaatgcaataaaaaaaaagatgttcttAATAAATGCCCCtcatgcttttatttgaatgtcTATATGTTTAGACACAGCCGATGGTGCAGAAAGGCATTAAACGTTCAGGAATGTTGTCCAGTGAGGTTATGTCGTATTGAGAGGTGGAGGTAGATTGTGATGTAGATGAGAACAGGTGGAGTGAGTtagttttaatcaaacacaaaGAAACTGTGAGAGAATCAACATATAATTGCTCTGTACAGAGATCGGCACATAAATACGATTCATGGcgaaaatgttaattaatgtacGAAAATCAGACATGAGTGATGAGCTGCAGCGGGAGGTTCTTCAATGCGCTCTTCTGGCTGTGAACATGCacgacaaaaacacagacatagcTAACTACATCAAGAAGGAATTCGACAGAAAGTACCAGCCCAACTGgcaatgcattgtgggaaagAGCAGTTGCTCTGTGTCACACAATCGTAACTCTTATATCTGTTTTGATGTTGGTGATAGACAAATAATACTATTTAAGACTAACTGAGCAACAgtttaaacacatttcattaaGGTGTTGGAGTGCAGTGTAATAAAATTTGGGTCTACTATTTTAGTTGCGGtggcattttgttttcatttgtatatgaataaacattttaatgacctttacttactgttttttctttttaataaatcccaTGGTAACTGTACCGAAATATCATATTTGATAATTTCATAATGCTAATTTCTAAAattgatttatgttttgatCAGCAAatgagcatttaaaaataatctaacTAAGGCATATTTATAAACGAC
>XR_006251573.1
TCTACAAACGAAACAGGGAACACAGGGCACTTTTAGTTTCAGTTCAAAATCTTTGCTCGTGTCACGATTTCACGAAAACTGTATCATTCTTACATCGGTGCAATTTGTATATGCAATAAATCCCACAAAACACCATTCTTAATAAGTGTCCCGCATGCTTTTCAGGGTCAATCAGTGATGCAGGACTCGTGTGTTTCAGTGTAGATGTTGTGGGGTATTTCAAGTGAAGAAATATTGCCACGTGAGAAGTGAAAGAGAGGTCGGTTCGTGATAAGAACAGGTGAAGCTAGTTACGCATTTTACATTCGTTTTGTTCGAACACAGCTTGAGAGACACAGACACTGAGATACTGAGTGAATTCGGCACTAAAAAAGATCAATGGCGAAAACATCAATTAATATACAGCAAGCGGACATGAGTCAAGAGCTGCAGCGGGAGGCTCTTCAGTGCGCTCTTCTGGCTGTGAACATGTACGAAAGCCACTCGGACATCGCTACGTACATCGCAAAGGAATTCGACAGAAGGGTCCAGCCCAAATGgcactgcattgtgggaaacTGTGGTTACTTTGTGAGACACAAGGATAACTGTTATATTTGCTTTGAAGTTGGAAATAAACGAATAACGCTTTTCAGGACTGACTGATCAACAGTTCAAACATTTGGTTAAGGAATTTCAGGTCTGCTGTTTTAGTTGCGGTGGcactttatgttttaatttgcatatgaataaacattttaattaccatAATTCGAGTTTTTTGGAATGGCATGGTTATAAACGACTGATATGTTCCGGACCTTTGTGAGATCCCGTCACTTACCAGGTTTTGATGTAAGAGTAAAAATATCTGGTTTTACTTGTTCTGGAAATCGtacaagtatttttattttcagatcgTCGCACAGAAAATGAGATGCTGATTTCGCATGACGAGTGTAAAACGGCAATAAATCGTGccacaatgcaataaaaaaaaagatgttcttAATAAATGCCCCtcatgcttttatttgaatgtcTATATGTTTAGACACAGCCGATGGTGCAGAAAGGCATTAAACGTTCAGGAATGTTGTCCAGTGAGGTTATGTCGTATTGAGAGGTGGAGGTAGATTGTGATGTAGATGAGAACAGGTGGAGTGAGTtagttttaatcaaacacaaaGAAACTGTGAGAGAATCAACATATAATTGCTCTGTACAGAGATCGGCACATAAATACGATTCATGGcgaaaatgttaattaatgtacGAAAATCAGACATGAGTGATGAGCTGCAGCGGGAGGTTCTTCAATGCGCTCTTCTGGCTGTGAACATGCacgacaaaaacacagacatagcTAACTACATCAAGAAGGAATTCGACAGAAAGTACCAGCCCAACTGgcaatgcattgtgggaaagAGCAGTTGCTCTGTGTCACACAATCGTAACTCTTATATCTGTTTTGATGTTGGTGATAGACAAATAATACTATTTAAGACTAACTGAGCAACAgtttaaacacatttcattaaGGTGTTGGAGTGCAGTGTAATAAAATTTGGGTCTACTATTTTAGTTGCGGtggcattttgttttcatttgtatatgaataaacattttaatgacctttacttactgttttttctttttaataaatcccaTGGTAACTGTACCGAAATATCATATTTGATAATTTCATAATGCTAATTTCTAAAattgatttatgttttgatCAGCAAatgagcatttaaaaataatctaacTAAGGCATATTTATAAACGACTGGTATTTATGTCATTCATGTTTGTAGCTATAAAGGTCTTATTGGTTTACATTAAACGCTATCAGAATTA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89214 False 1525 lncRNA 0.37 5 2024812 2027258
XR_006251573.1 True 1845 lncRNA 0.37 5 2024562 2027328

Neighbor

gene id symbol gene type direction distance location
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding upstream 9878 2006084 ~ 2014684 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding upstream 28703 1966583 ~ 1995859 (+)
LOC122350512 NA coding upstream 77613 1936761 ~ 1946949 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding upstream 197151 1822636 ~ 1827411 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding upstream 217160 1802695 ~ 1807402 (+)
mrpl40 LOC107753002,LOC107559600,LOC107699643,LOC107560058,LOC107754402,LOC107671004 coding downstream 28003 2055331 ~ 2058725 (+)
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding downstream 34213 2061541 ~ 2069288 (+)
si:ch211-51h9.7 NA coding downstream 42490 2069818 ~ 2071669 (+)
naif1 naif1,LOC107559603,LOC107753004 coding downstream 68831 2096159 ~ 2103906 (+)
fam102aa fam102aa,LOC107671017,LOC107699668,LOC107752986,LOC107754406,LOC105891604,LOC108430372 coding downstream 79062 2106390 ~ 2133931 (+)
G60288 NA non-coding upstream 21559 2000761 ~ 2003003 (+)
G60281 vdac3,LOC107671013,LOC107559564 non-coding upstream 25094 1967120 ~ 1999468 (+)
G60269 NA non-coding upstream 71436 1952793 ~ 1953126 (+)
G60265 NA non-coding upstream 74266 1947148 ~ 1950296 (+)
G60258 NA non-coding upstream 113395 1908528 ~ 1911167 (+)
G60279 rpl6 non-coding downstream 14174 2041502 ~ 2113333 (+)
G60296 NA non-coding downstream 126143 2153471 ~ 2156394 (+)
G60297 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048 non-coding downstream 131986 2159314 ~ 2162044 (+)
G60323 NA non-coding downstream 135979 2163307 ~ 2165242 (+)
G60328 NA non-coding downstream 165629 2192957 ~ 2204310 (+)
polb polb,LOC107670984,LOC107722860 other upstream 4528 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 106191 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 805758 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 1172558 842077 ~ 852004 (+)
G59807 NA other upstream 1219723 803653 ~ 804839 (+)
LOC122350053 NA other downstream 3496 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 10371 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1821286 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1897533 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 2001975 4029303 ~ 4073897 (+)

Expression


Co-expression Network