G60328


Basic Information

Item Value
gene id G60328
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2192957 ~ 2204310 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89239
ggaCAAAAATaaaaaaaaaagatatattttctgCTATATGggttatattttaattattgtgttattgtgtAATTCCAGTTGGAGGAAAGCTAATTATTTTGGgcaacaaaatagtttttttttttttttttgtccatgtaGATGATGTTCAGTTTGATGTGCTTTGACTTTTTTAGTCAagcgtttttgttttgctctagATTTAATCCATCATCAACCACGATTCATCACACTTCATCCACATGCTAAAGTAGCATTCAATAAAGTTGTAAATAGATCCCGGACAATTGCACACAAGTGAGATTTTATTAAGTCCGAACGTTACTGTTTTGTATTCGAGGCAACAATGCAAAAATTGGCCGAAGCGTTTACTGTGTGCCTTGCCGATAGACCCAAAAAGTCGAGACTTATCGATTTCAGAATTTGAAGCTTTCTCCTCCGATTTCTCTAGCAaggtttttataaaatgtgttttgtgacAAATTCTGTGCTGCACTGGATTGATTTCACAGATGAGGTCTGCTTAAGTTGAAGTAACATCACTGAAAAAGTTCCTGTATGCTGTCTTTGATCTTTAGCACTGGACTGCGTTGTTTTTCCACTGGATCGAGCTGTTACGGTTATACCGCGAGATGtgattgtatttgtatatttttatattgcgtTGCGTCATTTATACCATTGCCTTCTACTTGATGTAAATTTTTCAAATCTTATTACGAGACAAAAGCATCGTTTTATATTGCTTTACGTGAAATTCCTGAACGCGGCGTTTGAGTGGACGAATGGTACGACGTCAAATTAAAACAGCTTGTGAATGCAGCTGAgctatatatttcatttttcaggCAAACTGTGATTTTAGTACAAGAAGGGACTGTGTGTGACCGATCATAAAAGTGTgtcaaatgcatgaatgtataTCTGTGAAAAGCCATCGAAAGCTTTTTTGAGAAAGCGCTCGCCGTCCATTAAACGGTCCACGC

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0099528 G protein-coupled neurotransmitter receptor activity molecular_function

KEGG:

id description
ko04020 Calcium signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU89239 True 986 lncRNA 0.36 2 2192957 2204310

Neighbor

gene id symbol gene type direction distance location
sh3glb2a sh3glb2a,LOC107671032,LOC107754407 coding upstream 40566 2139230 ~ 2152391 (+)
fam102aa fam102aa,LOC107671017,LOC107699668,LOC107752986,LOC107754406,LOC105891604,LOC108430372 coding upstream 59026 2106390 ~ 2133931 (+)
naif1 naif1,LOC107559603,LOC107753004 coding upstream 89051 2096159 ~ 2103906 (+)
si:ch211-51h9.7 NA coding upstream 121288 2069818 ~ 2071669 (+)
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding upstream 123669 2061541 ~ 2069288 (+)
lhx2b lhx2b,lhx2 coding downstream 119289 2323599 ~ 2331771 (+)
LOC122349879 LOC107670988,LOC107552177,LOC107552180,LOC107552179,LOC107670991,LOC107754429,LOC107752990,LOC107553051 coding downstream 221009 2425319 ~ 2428603 (+)
ctu1 ctu1,LOC107752993,LOC107699664,LOC107552165,LOC107754430,LOC107670973 coding downstream 223878 2428188 ~ 2431630 (+)
pxnb pxnb,LOC107670974,LOC107699663,LOC107752988,LOC107553049,LOC107754409,LOC107552183,LOC102784766 coding downstream 227584 2431894 ~ 2464382 (+)
gcn1 gcn1,LOC107552181 coding downstream 260733 2465043 ~ 2508114 (+)
G60323 NA non-coding upstream 27715 2163307 ~ 2165242 (+)
G60297 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048 non-coding upstream 30913 2159314 ~ 2162044 (+)
G60296 NA non-coding upstream 36563 2153471 ~ 2156394 (+)
G60279 rpl6 non-coding upstream 79624 2041502 ~ 2113333 (+)
LOC122350140 NA non-coding upstream 165629 2024562 ~ 2027328 (+)
G60335 NA non-coding downstream 139626 2343936 ~ 2344169 (+)
G60342 LOC107552179,LOC107552180,LOC107670991,LOC107754429,LOC107552177,LOC107670988,LOC107682543 non-coding downstream 203785 2408095 ~ 2422217 (+)
G60347 NA non-coding downstream 316520 2520830 ~ 2524134 (+)
LOC122351006 NA non-coding downstream 352720 2557030 ~ 2559048 (+)
G60361 NA non-coding downstream 406007 2610317 ~ 2612227 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 153121 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 156977 2030824 ~ 2035980 (+)
polb polb,LOC107670984,LOC107722860 other upstream 172923 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 274586 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 974153 1210815 ~ 1218804 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1644304 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1720551 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 1824993 4029303 ~ 4073897 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 2900260 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 3022642 5226952 ~ 5229608 (+)

Expression


Co-expression Network