G60347


Basic Information

Item Value
gene id G60347
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2520830 ~ 2524134 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89288
cccggtgacagcttttgtacctttttttttttttttttttctgagagtgtagtaatttttttttaaatggcaataatTTGTCGATAGCATGCATATAACTTGGTTAAGTTTTGCTCCTGTAGTACCTCTCCTGCGGACCAGATCAGTCTTGTTCACATGGATCAGATGAATCGTGATGTACCGGGTCTGGATTGAGAGTTTTCACATGGTTTACATTCATTTGTGATCAGACTCCAGAGACGCTTACGAACCAGACTACACGACAGACGAGCGCGCGACATGGAGATCGTTCTAAAAAAGTTGATTCATCATTCAAAagttatacatttacaaatatatcgattcctttttttttttttcatttcaaacctgtctttgtatgtgtatatatatatatatatatatatatatatatatatatatatatataaaaaacaaaacaaaaaaaaaacgaatcgCTCTTTGGGTTTTTCCAAACCAAAAACTCTGCGAGAAAGAAGACGGCTGCATAGCTTTGCTCAAAATCTGCCCGACTTTCGCTGACTGAACCCccgcaaacacacacgcgcacacacacactcacgcgcaCACCCCGAACAcaggacagaaaacacagctCACGATCAGGACACAATCGCTCTCGTAGGCTGGAGGAAGTACACACTAGAAATGACCTGGGCTGTGTTCAAAATAACATGCTAGCCTACTACAGAACTAAAAGTTAAAGGATCTGAGGTACTAACATTTACCTTTTAAGGGTAAATAAAGGTGTTTTTCCTCTCACTGTGAcaattttttacctttttttctgagtgtATTCATACTACGCCTgcagtgtctttttttgtacAGCTACTACAGTAGCCAGAATGTGCATTACAGCTATACACTACTCACTGGACCGAatactgtatcccacaatgcaatgcacttgACTTGACCTTCCCTTTACAGTGTGACAAACGAACTGGTCGAAAAAAGAAGTCGAATGCAGCAGTACGTTCTGCATGCAGCGTGGCGATAGTCGTCCTTTAGAAAGCAGCTGATTTTATTCTGAACACAGCCGCGGTTTCAGTGCGTCTCTGAGGACTGAGATTTTCTAACGGTGAGTGTCGCCTGTCTCTGATTTCTACTGTTCGTACGCgtgtaaacctttttttttcgaTGCGCTCTATAAGTTACAGCTCTGCTCTTCGGTTCATTGACTGCCTGGCGTTCACCGTCAAGGACGTTTTCTCCAGAAATGTGCTAAAAAACAAGCAGGTATGTTTGATAAAACAGCCACGACGCATTTATGCTGCTAATTTCCTGTTGCGTTGTCATTTGTATATGTTGCGcgcttttatgcattttttttttttttaatctaagcAGCTGCTGAAagttcattttatataatatctgttaattacattcattatttgatttattcattagtttttttatctataaaatGCCTTTGTGAATGAACCCAAGAGCAGAGCGACTAGCTGTTTCTGGTTTTAAAGTGGCAGCGTTCAGATCTATAATTCAGGCCCAAACGGACCGATTCATGACATTCGCGTTACGCTGCGATATTCTCGTATTTCATCCCCAAAACCGGCCCAGAAGACGGGCCTGAAGCTCGACGGCGACGCTGAAGCTTTGTCCTGAAACCGCCTGAAGTCCAGTTGGTCCTGAGTTGAGTCTCTAGCGAATGCCGTGATTTGTGCCTCCGTGAATCTCTGGCAGTGAGGTGAGGAGAAGCTTTCCGAGGCACTCGCGGGGGAAACGGACCTCTGATAGGACTGGAGAATTCTGGGAACCCTGTTGAACAGACCCTTTGCGTTCTGCTCCTAAAGCTTTCTGAGGGACGATTGTGGGTACAGATAAAGTGCAAAACGGCTCAAAGCCATCAGAGAACTCGCTTTACCGGTGCGGTGGTTCTCAACCCGTTGGCCGCAGACAACATAAAACCTAGGTAGCCTTTATTAAGGTATTCAAAGTCTACTGTATGTTTTCAGAAACTCAACCTAACTGTAAAATTgcaaccaaaattaaaatgcattataaaatttgAAGGTTCGTGCGTTgcttttgtaatgcattaagGTGTAAAAACAATAGATGAGTATTATAATGCATCGTGAAATCATACAGTGCATAATGCCTTGTAGCTACCTTAATATTGCATTagcaaaatatttcagtttaaatttcatatttttgcttaaattgCATATAATTTCCATCTTTCCGGATTGCACCGTTTTAAAGAAGTAATACACTTAATGCGATGCATAAATGATCACAGCAGGTTCATAATTTTGGATTTGGATTATACTGATTAAAGCAAGCgaataaactaaatgtaaaaaaatatttcttcccTAAAGCAGCATAGCATGTAtgtgattttacttaatattatattttttaggatgcatttatttaaaaattagtttAGGTTCAAAAAATATTGGAACAagttatatttaattagttaaaatattaaaccaaatttgatttactaataataaatgtataaacccGGTTGCAGAAATCTTAtctgtttaatttatgtttgATATATATGCAGCACGTTAAGTTTGTTAAAAGGATGGAGGCTTTATGTGCAATTCAAATACATCAATCCAATTTTGATCTGATTAATTCGTGCATTTCAGTGTTTGATTTGAAAGATGTTGCGCTACTttgcaataaatcattttggttTTTGATGAGCACAGCCGGTTGAGGACCACCGATGCGGTGATTTAGACTTTCTTTGTCGTTTGTTGTACCCTTCTCTCACGTCTCTTCCTCCATGTCTTCAGATAGTCTCAGTTCTTCTTGAAGAATGAAAAGAGGCGCTTGTCTCCGTCCGAGAGGCGGTGCGCTCGTCTGGACGGAGCTCCTCCTCGTGACCCGTTGAAGGAGTACGGAGGATCCTTCCACTCGTCCTGGTGTTTATCCATCAGCTGTTGATCGATAACTCTGTGCATATCatcctgagagagagaaacggaCATCAGGGCCAGTCCCGTTTTCACACTTCTTTTACATTGTTTGGTCTGAACCGGGACTCAGTCCCTTCCAAAAACGTAACcaaaaaatgatatttgatCGTCAAATAAAATACGAATATTTCATGAGCATTTTTTACCTAAGCatctcaatttttttattttt
>TU89289
cccggtgacagcttttgtacctttttttttttttttttttctgagagtgtagtaatttttttttaaatggcaataatTTGTCGATAGCATGCATATAACTTGGTTAAGTTTTGCTCCTGTAGTACCTCTCCTGCGGACCAGATCAGTCTTGTTCACATGGATCAGATGAATCGTGATGTACCGGGTCTGGATTGAGAGTTTTCACATGGTTTACATTCATTTGTGATCAGACTCCAGAGACGCTTACGAACCAGACTACACGACAGACGAGCGCGCGACATGGAGATCGTTCTAAAAAAGTTGATTCATCATTCAAAagttatacatttacaaatatatcgattcctttttttttttttcatttcaaacctgtctttgtatgtgtatatatatatatatatatatatatatatatatatatatatatataaaaaacaaaacaaaaaaaaaacgaatcgCTCTTTGGGTTTTTCCAAACCAAAAACTCTGCGAGAAAGAAGACGGCTGCATAGCTTTGCTCAAAATCTGCCCGACTTTCGCTGACTGAACCCccgcaaacacacacgcgcacacacacacacacacacacacacacacacacacacactcacacacacacacatactcacacgcacacacacacacacacacacacacacacacacgcgcacacacacactcacgcgcaCACCCCGAACAcaggacagaaaacacagctCACGATCAGGACACAATCGCTCTCGTAGGCTGGAGGAAGTACACACTAGAAATGACCTGGGCTGTGTTCAAAATAACATGCTAGCCTACTACAGAACTAAAAGTTAAAGGATCTGAGGTACTAACATTTACCTTTTAAGGGTAAATAAAGGTGTTTTTCCTCTCACTGTGAcaattttttacctttttttctgagtgtATTCATACTACGCCTgcagtgtctttttttgtacAGCTACTACAGTAGCCAGAATGTGCATTACAGCTATACACTACTCACTGGACCGAatactgtatcccacaatgcaatgcacttgACTTGACCTTCCCTTTACAGTGTGACAAACGAACTGGTCGAAAAAAGAAGTCGAATGCAGCAGTACGTTCTGCATGCAGCGTGGCGATAGTCGTCCTTTAGAAAGCAGCTGATTTTATTCTGAACACAGCCGCGGTTTCAGTGCGTCTCTGAGGACTGAGATTTTCTAACGGTGAGTGTCGCCTGTCTCTGATTTCTACTGTTCGTACGCgtgtaaacctttttttttcgaTGCGCTCTATAAGTTACAGCTCTGCTCTTCGGTTCATTGACTGCCTGGCGTTCACCGTCAAGGACGTTTTCTCCAGAAATGTGCTAAAAAACAAGCAGGTATGTTTGATAAAACAGCCACGACGCATTTATGCTGCTAATTTCCTGTTGCGTTGTCATTTGTATATGTTGCGcgcttttatgcattttttttttttttaatctaagcAGCTGCTGAAagttcattttatataatatctgttaattacattcattatttgatttattcattagtttttttatctataaaatGCCTTTGTGAATGAACCCAAGAGCAGAGCGACTAGCTGTTTCTGGTTTTAAAGTGGCAGCGTTCAGATCTATAATTCAGGCCCAAACGGACCGATTCATGACATTCGCGTTACGCTGCGATATTCTCGTATTTCATCCCCAAAACCGGCCCAGAAGACGGGCCTGAAGCTCGACGGCGACGCTGAAGCTTTGTCCTGAAACCGCCTGAAGTCCAGTTGGTCCTGAGTTGAGTCTCTAGCGAATGCCGTGATTTGTGCCTCCGTGAATCTCTGGCAGTGAGGTGAGGAGAAGCTTTCCGAGGCACTCGCGGGGGAAACGGACCTCTGATAGGACTGGAGAATTCTGGGAACCCTGTTGAACAGACCCTTTGCGTTCTGCTCCTAAAGCTTTCTGAGGGACGATTGTGGGTACAGATAAAGTGCAAAACGGCTCAAAGCCATCAGAGAACTCGCTTTACCGGTGCGGTGGTTCTCAACCCGTTGGCCGCAGACAACATAAAACCTAGGTAGCCTTTATTAAGGTATTCAAAGTCTACTGTATGTTTTCAGAAACTCAACCTAACTGTAAAATTgcaaccaaaattaaaatgcattataaaatttgAAGGTTCGTGCGTTgcttttgtaatgcattaagGTGTAAAAACAATAGATGAGTATTATAATGCATCGTGAAATCATACAGTGCATAATGCCTTGTAGCTACCTTAATATTGCATTagcaaaatatttcagtttaaatttcatatttttgcttaaattgCATATAATTTCCATCTTTCCGGATTGCACCGTTTTAAAGAAGTAATACACTTAATGCGATGCATAAATGATCACAGCAGGTTCATAATTTTGGATTTGGATTATACTGATTAAAGCAAGCgaataaactaaatgtaaaaaaatatttcttcccTAAAGCAGCATAGCATGTAtgtgattttacttaatattatattttttaggatgcatttatttaaaaattagtttAGGTTCAAAAAATATTGGAACAagttatatttaattagttaaaatattaaaccaaatttgatttactaataataaatgtataaacccGGTTGCAGAAATCTTAtctgtttaatttatgtttgATATATATGCAGCACGTTAAGTTTGTTAAAAGGATGGAGGCTTTATGTGCAATTCAAATACATCAATCCAATTTTGATCTGATTAATTCGTGCATTTCAGTGTTTGATTTGAAAGATGTTGCGCTACTttgcaataaatcattttggttTTTGATGAGCACAGCCGGTTGAGGACCACCGATGCGGTGATTTAGACTTTCTTTGTCGTTTGTTGTACCCTTCTCTCACGTCTCTTCCTCCATGTCTTCAGATAGTCTCAGTTCTTCTTGAAGAATGAAAAGAGGCGCTTGTCTCCGTCCGAGAGGCGGTGCGCTCGTCTGGACGGAGCTCCTCCTCGTGACCCGTTGAAGGAGTACGGAGGATCCTTCCACTCGTCCTGGTGTTTATCCATCAGCTGTTGATCGATAACTCTGTG

Function

GO:

id name namespace
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU89288 True 3171 lncRNA 0.39 2 2520830 2524134
TU89289 False 3081 lncRNA 0.40 2 2520830 2523944

Neighbor

gene id symbol gene type direction distance location
rab35b rab35b,rab35,LOC107699662,LOC107671023,LOC108430363 coding upstream 1948 2510789 ~ 2518882 (+)
gcn1 gcn1,LOC107552181 coding upstream 12716 2465043 ~ 2508114 (+)
pxnb pxnb,LOC107670974,LOC107699663,LOC107752988,LOC107553049,LOC107754409,LOC107552183,LOC102784766 coding upstream 56448 2431894 ~ 2464382 (+)
ctu1 ctu1,LOC107752993,LOC107699664,LOC107552165,LOC107754430,LOC107670973 coding upstream 89200 2428188 ~ 2431630 (+)
LOC122349879 LOC107670988,LOC107552177,LOC107552180,LOC107552179,LOC107670991,LOC107754429,LOC107752990,LOC107553051 coding upstream 92227 2425319 ~ 2428603 (+)
LOC122350791 LOC107715152,LOC100333880,LOC107699660 coding downstream 36219 2560353 ~ 2609576 (+)
myl2b myl2b,myl2,LOC107699636,LOC101071916,LOC103044021 coding downstream 270974 2795108 ~ 2802294 (+)
pptc7a pptc7a,LOC107552188,LOC107553043,LOC107671007,LOC107699657,LOC105891618,LOC108430358,LOC103044306 coding downstream 280151 2804285 ~ 2813140 (+)
srrd srrd,LOC107699635,LOC107714588 coding downstream 300138 2824272 ~ 2826296 (+)
cldn5a cldn5a,LOC107713023,LOC107552167,LOC107714561,LOC107553040,LOC107699651,LOC107670982 coding downstream 388558 2912692 ~ 2913737 (+)
G60342 LOC107552179,LOC107552180,LOC107670991,LOC107754429,LOC107552177,LOC107670988,LOC107682543 non-coding upstream 98613 2408095 ~ 2422217 (+)
G60335 NA non-coding upstream 176661 2343936 ~ 2344169 (+)
G60328 NA non-coding upstream 316520 2192957 ~ 2204310 (+)
G60323 NA non-coding upstream 355588 2163307 ~ 2165242 (+)
G60297 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048 non-coding upstream 358786 2159314 ~ 2162044 (+)
LOC122351006 NA non-coding downstream 32896 2557030 ~ 2559048 (+)
G60361 NA non-coding downstream 86183 2610317 ~ 2612227 (+)
G60369 NA non-coding downstream 108583 2632717 ~ 2634015 (+)
G60452 NA non-coding downstream 428882 2953016 ~ 2953994 (+)
LOC122349907 NA non-coding downstream 474773 2998907 ~ 3000982 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 480994 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 484850 2030824 ~ 2035980 (+)
polb polb,LOC107670984,LOC107722860 other upstream 500796 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 602459 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 1302026 1210815 ~ 1218804 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1324480 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1400727 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 1505169 4029303 ~ 4073897 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 2580436 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 2702818 5226952 ~ 5229608 (+)

Expression


Co-expression Network