G60487 (dynll1,dyl1,LOC107559583,LOC100698873)


Basic Information

Item Value
gene id G60487
gene name dynll1,dyl1,LOC107559583,LOC100698873
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2037700 ~ 2039825 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89490
GCCAAAccattttgctttaataaaaaaaaacgcgGGTGACATAAAACGCTCAAACCGtgtatagaaaacaaaaataaatacaagtgtTTCTTTATGGCATTTTCCTCTCACACGGGCTTTTTCTAAACAATAATCAGAACGAAAGGAGAAGCAGCCGAGAGAAGGAAGGCAGGTCCCAGTGCAGGAATGGTTCGCCTTGTCAGTACAGTCAGTTCGTAATGGTCTGTTGAAatggatgggtgccgtcgcTCAGCCCGATTTGAAGAGCAGGATGGCCACCTGACCCAGGTAGAAGTAGATGAAATGTTTGGTCTCGTGAGTCACGTAACTGCCGAAGTTCCTCCCCACGATGCAGTGCCAGGTGGGATTGTACTTTTTGTCGAACTCatttttattcatattctgTGGCCGGTAAAGCGTTCCGCCCACTGAAGCGGCGTTTACCTTCTTGATGTAGGCGGCGATGTCCTTCTCGATGTTGTACTTCTCGAGCGCCTGTGTTGCACACTCCACAGCGTCCTGCTGCATCTCCTCAGACATGTCCGCATTTTTGATGACTGCCTTTCTGTCCGACATGCTGGATCTGCGGAGAGACAGAGGAGTCGAATGCTGAACGAACGAGATAAACAGGGCTCGATCCGAGCGACACCCTGTGACGCACCCTACATAGTGCTCATCCTGCTCTCTGCCCTGCCCCAAACCCACAGTCCTCCAGCGTCTGCTCGGAGACGGCCGGGCGTCAGAGTCGTCCGCACCAGCCGGGCGGACGTTACATAATATCTCCACAGCCTTTATTCCATCTTTATTGCATAACATCACGTGGCGTATTTTGCCAGGTTACTGTTGCCATGGTCACCTGAGCTAAAGACCATACTCAGCACCACAGATTAATTCAACAAACTTATGATACTCATCATGCTTATATAACTATTAATAGTTTACTAACATAATCAATCAAATTGTgccttatttttattagtaaacgacaaatgaatgggtgccacggttatttttagaaataagaAACACTTTACATCGTCGTTTCTTAACGGCAAATGAAATAATCCCGTAtctttttgcttttgttctAAAAAATCATATCTTTAATAACtgctttcatttatatttaatgcagcTGCTGAAACAAGGTGTGCAAACGGTCAACTGCCGTTAGGCACAACATCGCTTACTCTAACCGACAAGAAAACACATGATGTTTTGCTCTAAAGATTAATATGCATCGTAAGCTGCAATCAACGGACGAAAGGGAAAGTTTTACCTTATTTCTGTGCAGATTTGTTGAGACGGAGAGAAACGCGACTCGCTCGCAGCGCCTGAGATGCTCCCGCTGTGTGCTTGACCAAAAGCAATGTAGGTGTGCGACCGCCGTTGGCTCCTCCCCCTCTCGCTTAGCA

Function

symbol description
dynll1 Predicted to enable dynein intermediate chain binding activity and dynein light intermediate chain binding activity. Predicted to be involved in cilium assembly. Predicted to act upstream of or within microtubule-based process. Predicted to be located in cytoplasm and microtubule. Predicted to be part of cytoplasmic dynein complex. Orthologous to human DYNLL1 (dynein light chain LC8-type 1).

NR:

description
dynein light chain 1, cytoplasmic

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89490 True 1415 lncRNA 0.46 2 2037700 2039825

Neighbor

gene id symbol gene type direction distance location
vdac3 vdac3,LOC107754399,LOC107671013,LOC107560056 coding downstream 29600 1996550 ~ 2008100 (-)
plat plat,LOC107754398,LOC107657211,LOC107671043 coding downstream 72647 1947141 ~ 1965053 (-)
si:dkeyp-117b11.1 LOC107670989,LOC107657213,LOC107754414,LOC107722857,LOC107560032,LOC107559594,LOC107559561 coding downstream 100828 1927729 ~ 1936872 (-)
cltcl1 LOC107559593,LOC107670971,LOC108412499 coding downstream 110978 1880738 ~ 1926722 (-)
si:dkey-178e17.1 slc25a1,LOC107754397,LOC107670994,LOC107657208,LOC107722854,LOC108412497 coding downstream 158801 1857920 ~ 1878899 (-)
rpl6 LOC107699672,LOC107671003,LOC107559598 coding upstream 1729 2041554 ~ 2044605 (-)
acaa2 acaa2,LOC107671002 coding upstream 6291 2046116 ~ 2055183 (-)
seta seta,LOC107699670,LOC107752982,LOC107754404,LOC107560061,LOC107671021 coding upstream 32064 2071889 ~ 2075596 (-)
zdhhc12a LOC107699641,LOC107560045 coding upstream 36322 2076147 ~ 2081503 (-)
slc25a25a slc25a25a,LOC107671014,LOC107754405,LOC107699669,LOC107560063,LOC108430373,LOC107559565 coding upstream 42216 2082041 ~ 2089293 (-)
G60473 NA non-coding downstream 42955 1991335 ~ 1994745 (-)
G60471 NA non-coding downstream 49147 1987773 ~ 1988553 (-)
G60237 NA non-coding downstream 187767 1849488 ~ 1849933 (-)
G60204 NA non-coding downstream 257347 1726225 ~ 1780353 (-)
LOC122349999 NA non-coding downstream 272157 1717401 ~ 1765543 (-)
G60510 NA non-coding upstream 84233 2124058 ~ 2124341 (-)
G60519 NA non-coding upstream 127107 2166932 ~ 2168247 (-)
G60530 NA non-coding upstream 209517 2249342 ~ 2253090 (-)
G60532 NA non-coding upstream 242713 2282538 ~ 2282891 (-)
G60542 NA non-coding upstream 298734 2338559 ~ 2338844 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other downstream 216050 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other downstream 275151 1749062 ~ 1762549 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other downstream 431091 1561546 ~ 1606609 (-)
G60220 NA other downstream 457084 1576805 ~ 1580616 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other downstream 680747 1349171 ~ 1356953 (-)
c8h22orf39 si:ch211-51h9.6,LOC107699642,LOC107560060,LOC107670995,LOC107753003,LOC107754424,LOC107559584 other upstream 19569 2059394 ~ 2061481 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other upstream 91544 2131369 ~ 2162003 (-)
G60564 pxnb other upstream 421106 2460931 ~ 2464371 (-)
bicdl1 bicdl1,LOC107553048 other upstream 481389 2521214 ~ 2552187 (-)
rad9b LOC105891618,LOC107713043,LOC107671006,LOC107552191,LOC107714555 other upstream 742795 2782620 ~ 2823826 (-)

Expression


Co-expression Network