G60639


Basic Information

Item Value
gene id G60639
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2945410 ~ 2945931 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89740
TACGTATGTTAATTATGAGATTTGAAATAGATTTAATGAGATTCTAAATgtagtttctttcttattccaGGATATTTCTAGACGTTTCCATGAGATTGAAGCGTAATAACGGAGCACCTGCTGTTGTCGCAGAGCGAGGCTCTTGCAAGTGAGAAAACTTCAGCAGCTGATCTGTTTTTGGAGGTGATTTCTCTGAGGACCGTCTTGATCCGCAGCAGCTGAGTGAGGGAGCATGATGTGAAGCGCATGAAGTATGAACGCATGAATCACGACAGACGCGGCGAAGTGTGCTGACCTCCTGATACTGTGCGGTGTTGGCGTGATAGAGCTGCCGGATGATGAGCTCGCACTCGTCCAGCGTCGGGGTCCGGGGCTGCTGGGACGGGCTGCAGGTGATCCTGAGAGGCAGCAGAGACGTGACtgcaccacctcctcctcctcctccctcggACACCTCCTCTGAGCTAGAGTGGGTCACAGCAGGAGGACGTGTGATTTACTTGGTTAAACGAGGTCAGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89740 True 522 lncRNA 0.51 1 2945410 2945931

Neighbor

gene id symbol gene type direction distance location
ciao1 ciao1,LOC107714582,LOC107671031,LOC107713036 coding downstream 7066 2934045 ~ 2938344 (-)
cdc45 cdc45,LOC107699634,LOC107670985 coding downstream 15475 2921713 ~ 2929935 (-)
zgc:63587 zgc:63587,LOC100700755,LOC101064433,LOC103397778 coding downstream 33549 2884344 ~ 2911861 (-)
sept5a sept5,sept5a,LOC107713038,LOC107671025,LOC107553041,LOC107699650,LOC107714585 coding downstream 62071 2869613 ~ 2883339 (-)
gp1bb LOC107713039,LOC107671026 coding downstream 76654 2865388 ~ 2868756 (-)
igsf9b igsf9b,LOC107552192,LOC107671028,LOC107713033,LOC107699646,LOC107714578,LOC107553037 coding upstream 6802 2952733 ~ 2993383 (-)
tmem230b tmem230b,ct030,tmem230,LOC107713020,LOC107553029,LOC107670990,LOC103023473,LOC101077900,LOC106579885 coding upstream 48004 2993935 ~ 2998395 (-)
dpysl2a dpysl2a,dpysl2,LOC107713031,LOC107671020,LOC108430340,LOC108266046,LOC108277094,LOC108427246 coding upstream 97250 3043181 ~ 3067341 (-)
bnip3la bnip3la,LOC107552154,LOC107560275,LOC107699644,LOC107671016,LOC107714550 coding upstream 123570 3069501 ~ 3080742 (-)
ppp2r2aa ppp2r2aa,LOC107671018,LOC107713030,LOC107699615,LOC108430337,LOC106585558 coding upstream 135955 3081886 ~ 3091387 (-)
G60640 LOC107699617,LOC107714575,LOC107553039,LOC107670999,LOC107552195 non-coding downstream 1403 2943717 ~ 2944007 (-)
G60638 tmem127,LOC107552193,LOC107713035,LOC107699648,LOC107671030,LOC107553020,LOC107714579 non-coding downstream 4932 2939280 ~ 2940478 (-)
G60604 LOC107715152,LOC107553025,LOC107670977 non-coding downstream 333181 2601709 ~ 2612229 (-)
G60566 gcn1,LOC107552181,LOC107754417,LOC107553027,LOC107699625 non-coding downstream 371406 2506238 ~ 2574004 (-)
G60548 NA non-coding downstream 529909 2410413 ~ 2415501 (-)
G60719 NA non-coding upstream 615078 3561009 ~ 3561418 (-)
G60720 NA non-coding upstream 616661 3562592 ~ 3563073 (-)
G60721 NA non-coding upstream 617601 3563532 ~ 3564937 (-)
G60722 LOC107696914,LOC107713026,LOC107552198,LOC107584864,LOC107674302,LOC107714559 non-coding upstream 621885 3567816 ~ 3569810 (-)
G60729 NA non-coding upstream 633630 3579561 ~ 3579961 (-)
rad9b LOC105891618,LOC107713043,LOC107671006,LOC107552191,LOC107714555 other downstream 121584 2782620 ~ 2823826 (-)
bicdl1 bicdl1,LOC107553048 other downstream 393223 2521214 ~ 2552187 (-)
G60564 pxnb other downstream 481039 2460931 ~ 2464371 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other downstream 783407 2131369 ~ 2162003 (-)
c8h22orf39 si:ch211-51h9.6,LOC107699642,LOC107560060,LOC107670995,LOC107753003,LOC107754424,LOC107559584 other downstream 883929 2059394 ~ 2061481 (-)
G60679 adra1aa,LOC107553034,LOC107699645,LOC107713032,LOC107671010,LOC107552152 other upstream 86536 3032467 ~ 3035092 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other upstream 899522 3845453 ~ 3850590 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other upstream 1054400 4000331 ~ 4006806 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other upstream 1142793 4088724 ~ 4092157 (-)
G61023 NA other upstream 1355061 4300992 ~ 4307499 (-)

Expression


Co-expression Network