G60718


Basic Information

Item Value
gene id G60718
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3569494 ~ 3570284 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89844
AAGAGGTTAATTATCCATTTGAGAAGGAAacgattttatattataatgaaaagtacactttttttactaaactgtgacaaaaaaagaattttttgtaacatttggGTGATTGGGACAGCAAATATTGTTGATTTAGGttagttaatatttattgcaaaagttcataatttaatatttaatattttatgcagaTATTACTGGGACATTGTTATTGGggtgttataatattttttcataattaaggctacttgtttatttctgttcattataactaacttttataaaacaaatttcattaaacacattttattctcTCCATCAAATTTtactaaacatttaattgtCTTTCAAATTTCATTGAACATTTAAATCTCACcctcaattttaattaaaagcattttattttctcccCCAAATTTCATTGAACATTTAATGCTCACTCTCAGATTtcaattaacacatttatttttctccattAACTTTTATTGAACATTTCATTCTCAACCCCAAAGGCCCTTTTTGTCCCCCTTGAAGACTTGACTTCTAACAGCCATTGCAAAATTAACAATTCAAAAAAATCAGGtccaaattttattaaaaactattcatttatttgcctTTAACCGTTGTCCCAATCACCCAAAATCATATTGGATTATTTTTGCCCCGCCCACTTACATGATGTCACACCAATGAGAACATGCAAATTTGATTatgtagaaaaacattttaccttATGTCCCAATCACTGTTTATTCAGTTTATGTTTaagctatttaaaaagaaaataa

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89844 True 791 lncRNA 0.27 1 3569494 3570284

Neighbor

gene id symbol gene type direction distance location
vsig8b LOC107696914,LOC107713026,LOC107552198,LOC107714559,LOC107584864,LOC107674302 coding upstream 577 3555598 ~ 3568917 (+)
lrrtm4l2 lrrtm4l2,LOC107714548,LOC107674311,LOC107696910,LOC107584861,LOC107713015 coding upstream 43550 3497424 ~ 3525944 (+)
adra1aa adra1aa,LOC107553034,LOC107699645,LOC107552152,LOC107713032,LOC107671010,LOC108430341 coding upstream 535595 3015349 ~ 3033899 (+)
gatd3l es1,LOC107553036,LOC107671040,LOC107713034,LOC108430344 coding upstream 616810 2948990 ~ 2952684 (+)
LOC122350330 LOC107553039,LOC107714575,LOC107670999,LOC107552195 coding upstream 622145 2943281 ~ 2947349 (+)
LOC122350663 tas2r202,LOC107696909,LOC107713025,LOC107552176,LOC107584865,LOC107714564 coding downstream 5247 3575531 ~ 3576550 (+)
nefmb nefmb,LOC107714570,LOC107674305,LOC107751590,LOC107552168,LOC107751596,LOC107696904 coding downstream 77718 3648002 ~ 3652067 (+)
asic1a asic1a,LOC107584862,LOC107751588,LOC107696918,LOC107674327,LOC107714557,LOC108439661 coding downstream 111249 3681533 ~ 3703724 (+)
gpd1a gpd1a,LOC107696907,LOC107751598,LOC107552204,LOC106571950,LOC106566713 coding downstream 134581 3704865 ~ 3711035 (+)
abtb1 abtb1,LOC107674366,LOC107696919,LOC107751593 coding downstream 156286 3726570 ~ 3737104 (+)
G60673 LOC107699615,LOC107552196 non-coding upstream 483121 3085756 ~ 3086373 (+)
G60668 bnip3la,LOC107552154,LOC107714550,LOC107699644,LOC107560275,LOC107671016 non-coding upstream 488771 3076876 ~ 3080723 (+)
G60661 NA non-coding upstream 511648 3056299 ~ 3057846 (+)
G60660 dpysl2a,LOC107552153,LOC107713031,LOC107671020,LOC108266046,LOC108430340,LOC107560268,LOC103154404 non-coding upstream 513475 3055427 ~ 3056019 (+)
LOC122349907 NA non-coding upstream 568512 2998907 ~ 3000982 (+)
G60728 NA non-coding downstream 9218 3579502 ~ 3579982 (+)
LOC122350949 NA non-coding downstream 37031 3607315 ~ 3607977 (+)
G60743 NA non-coding downstream 84477 3654761 ~ 3655932 (+)
G60782 NA non-coding downstream 254618 3824902 ~ 3826416 (+)
G60803 LOC107552212,LOC107701823,LOC107743103,LOC107674315,LOC107727414 non-coding downstream 314598 3884882 ~ 3885873 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 1529658 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 1533514 2030824 ~ 2035980 (+)
polb polb,LOC107670984,LOC107722860 other upstream 1549460 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 1651123 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 2350690 1210815 ~ 1218804 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 278330 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 354577 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 459019 4029303 ~ 4073897 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 1534286 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 1656668 5226952 ~ 5229608 (+)

Expression


Co-expression Network