G60743


Basic Information

Item Value
gene id G60743
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3654761 ~ 3655932 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89876
ATTTTTATTAGTAGGCAATGAGCCTTTCTTTGAGGATCAGGTCTAAGGCATTTTGAATACTAAGCACACTTGTGTTATCATAGGCAGTTAACAGGGTGATTAATGCTGAGGGCATACAGACACAATGCTCAAAGAATATTATTcgcatttcaataaataaaacagcaatcaAAACAACACAAGCAACCTGCAATCACAACTTCCCTGCCAAGCACAAAAGTAAGGCATGTCTTCATGCATAGGCTGCTCTGGCTTTGGCCGATCTctatggctgcatttattattcttatctGCGTATATGGTCAGCTTCCAATTTGAACTGAATCTGAAATCGATCAGCAGGACACAGTGAAGTTGTCTTCTAGATGTCTGCGTGTTTGAGATAAATGCATGAGGATTGATCACCTCCAGATAGCACCAGGGGGTTTGGTCCGGTGTGTTTACTTCTCTTTTGGCTTGGCTTTCTCatctttgctctctttctcctctcctcctttcttcttctcctcttgTTTTCCAGCATCATCCTTCTCAGCCTCGTCTTCTACTTCTTCACcttcaccttcttcttcttcaccttCTTTACCCTCTCCTTCCTCTTCTGCTTCATCTCCCTCTTttccttcttcctcttcctctgcttcttttccttcttcctcttcctgatCTCCTTCATCCTCACCTTCTTCCTCTCCTTCCTCTTCACCTCCTTCTTCACCTtcctcttcttcttcctcctccttctcaccctcttcctcttctacctcctcctcttcctcatcttcttTCTCTGGACTTGCCCCAGCTTCCTGTGCCTGGCTGGCTTCAATCAATTCATCTGGTGTAGCGGAGTAGCTCATCAGTCTGGTTCCCAGAAGATAGGGGGCGCCAGAGCTCAGACTGGCCTGCACAGAGAACACGGGACGGCCGAAAGAAGGAGTGGCGGCAATGGAGGGAGAAAACACACTGGAGATCCCACCAATACCACCTACGTTGAAACGTGTTTCTTCACCTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89876 True 1018 lncRNA 0.46 2 3654761 3655932

Neighbor

gene id symbol gene type direction distance location
nefmb nefmb,LOC107714570,LOC107674305,LOC107751590,LOC107552168,LOC107751596,LOC107696904 coding upstream 2694 3648002 ~ 3652067 (+)
LOC122350663 tas2r202,LOC107696909,LOC107713025,LOC107552176,LOC107584865,LOC107714564 coding upstream 78211 3575531 ~ 3576550 (+)
vsig8b LOC107696914,LOC107713026,LOC107552198,LOC107714559,LOC107584864,LOC107674302 coding upstream 85844 3555598 ~ 3568917 (+)
lrrtm4l2 lrrtm4l2,LOC107714548,LOC107674311,LOC107696910,LOC107584861,LOC107713015 coding upstream 128817 3497424 ~ 3525944 (+)
adra1aa adra1aa,LOC107553034,LOC107699645,LOC107552152,LOC107713032,LOC107671010,LOC108430341 coding upstream 620862 3015349 ~ 3033899 (+)
asic1a asic1a,LOC107584862,LOC107751588,LOC107696918,LOC107674327,LOC107714557,LOC108439661 coding downstream 25601 3681533 ~ 3703724 (+)
gpd1a gpd1a,LOC107696907,LOC107751598,LOC107552204,LOC106571950,LOC106566713 coding downstream 48933 3704865 ~ 3711035 (+)
abtb1 abtb1,LOC107674366,LOC107696919,LOC107751593 coding downstream 70638 3726570 ~ 3737104 (+)
slc6a6a slc6a6a,LOC107696920,LOC107552205,LOC107714566,LOC108264963,LOC107674322 coding downstream 87553 3743485 ~ 3765088 (+)
LOC122350989 LOC107751585,LOC107696922,LOC107552208,LOC107584868,LOC107674323,LOC107584869 coding downstream 144346 3800278 ~ 3807847 (+)
LOC122350949 NA non-coding upstream 46784 3607315 ~ 3607977 (+)
G60728 NA non-coding upstream 74779 3579502 ~ 3579982 (+)
G60718 NA non-coding upstream 84477 3569494 ~ 3570284 (+)
G60673 LOC107699615,LOC107552196 non-coding upstream 568388 3085756 ~ 3086373 (+)
G60668 bnip3la,LOC107552154,LOC107714550,LOC107699644,LOC107560275,LOC107671016 non-coding upstream 574038 3076876 ~ 3080723 (+)
G60782 NA non-coding downstream 168970 3824902 ~ 3826416 (+)
G60803 LOC107552212,LOC107701823,LOC107743103,LOC107674315,LOC107727414 non-coding downstream 228950 3884882 ~ 3885873 (+)
G60870 NA non-coding downstream 251780 3907712 ~ 3908800 (+)
G60895 NA non-coding downstream 484677 4140609 ~ 4215206 (+)
G61007 NA non-coding downstream 645740 4301672 ~ 4342107 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 1614925 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 1618781 2030824 ~ 2035980 (+)
polb polb,LOC107670984,LOC107722860 other upstream 1634727 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 1736390 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 2435957 1210815 ~ 1218804 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 192682 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 268929 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 373371 4029303 ~ 4073897 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 1448638 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 1571020 5226952 ~ 5229608 (+)

Expression


Co-expression Network