G60819


Basic Information

Item Value
gene id G60819
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3645219 ~ 3704454 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU89985
TTAAGAACTGACGGTAAAgcttaaaatctatttttagcACGAGCAATCAATAAGTTATAAAGTGAGATGGCAAGGATAAAGTAGACATGCAAACCTGTCACGAACGGGGAAATGTGAGACATTGTAACGGTCCTGCATGTAATGCAAAGCATAGTTTCTTCTTTTATTAACTTCTGATTGAAACGTGAGACATTTTTGTGAGATCCGGCCACCCAAGTAAAAGATCAACTGATTCATCGGCTTAATTTAACAAAGGAACTGAGTGGCTTAAGATGGCAAAATGAACAATAGAATACACTGttgagaaataaatgaaataccaGAGCAGTTCTCAGGGGTGAAAGGTCAAAGTTGTATGTGGCTCAGAGGAGGAATTCCTCAATTCAAAAGGATTATTTTTGggttatttattcagtattaattcatatttttaattgttttgagataattcaaaatatcaattaacttgtattttatgttttatttttcatttaaattttagaaattttgttgaagtttcaaataaatttttttatttagctttaaatgttttaaattttagttattttaaaacagctgccaaatcattttttttttaattctcaaattttatattttattttatcgcagaaaatgatttttagtaGATTCGGTTATTAATAGCAACACAGCTTGGCCCAAAATTAGttgaagacagacagaaatattCAAGGCAGCCTGGTAAGCAAGACAgaattttatgcatgtttattcatttttaaaaaatcatattttattacagccACATgataaacatcaaaataatacagaaatgtttcagttgaaaaagtttgatttacatattaataCCGTTGATATTTGACAATCCTGCTTTTGTAGGAAATACTGAAAATTGATTTGTGTGGTTTTCTGAAAAGAAACCAGACCGGAATCCGCTGTATATGAGGAATGTTGTGTCTAATATGTAAATCTgacatgaaaaaatattcataaactaCCGTAGTCCACAACGAATCTATCTGCTGGCGTTTGACGCATCTTTCTAATGCATCACAGGCTTAAAAATACTTCATTTCCCGTTTAAAAATATCTGTCACCCTGTTGCTCCAACTTTTCCTCATCCATTCCAGAAATGACcacatgtaatatatacatgcacaaagACGCACttacaaacagacaaacacatcCATGCACTTGCAGTCAAGCttgcgcgcgcgcacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

GO:

id name namespace
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89985 True 1308 lncRNA 0.33 2 3645219 3704454

Neighbor

gene id symbol gene type direction distance location
dock5 dock5,LOC107674342,LOC107714571,LOC107696915,LOC107713013 coding downstream 9025 3583344 ~ 3636194 (-)
LOC122351051 lrrtm4,LOC107713029,LOC107552197,LOC107671041,LOC107714573,LOC108413329,LOC107694817,LOC107560276 coding downstream 269037 3209091 ~ 3376182 (-)
ppp2r2aa ppp2r2aa,LOC107671018,LOC107713030,LOC107699615,LOC108430337,LOC106585558 coding downstream 553832 3081886 ~ 3091387 (-)
bnip3la bnip3la,LOC107552154,LOC107560275,LOC107699644,LOC107671016,LOC107714550 coding downstream 564477 3069501 ~ 3080742 (-)
dpysl2a dpysl2a,dpysl2,LOC107713031,LOC107671020,LOC108430340,LOC108266046,LOC108277094,LOC108427246 coding downstream 577878 3043181 ~ 3067341 (-)
si:ch73-233m11.2 LOC107674326,LOC107714544,LOC107580288 coding upstream 7163 3711617 ~ 3719423 (-)
si:dkey-222n6.2 LOC107751587,LOC107696908,LOC107552203 coding upstream 16180 3720634 ~ 3725257 (-)
grip2a grip2a,LOC107751584,LOC107696921,LOC107714565,LOC107584908,LOC107552207 coding upstream 62100 3766554 ~ 3800174 (-)
hdac6 hdac6,LOC107743106,LOC107701824,LOC107584872,LOC107552211,LOC107727426,LOC107674364 coding upstream 147040 3851494 ~ 3864352 (-)
gata1b LOC107552162,LOC107743132,LOC107701810 coding upstream 163026 3867480 ~ 3873578 (-)
G60729 NA non-coding downstream 65258 3579561 ~ 3579961 (-)
G60722 LOC107696914,LOC107713026,LOC107552198,LOC107584864,LOC107674302,LOC107714559 non-coding downstream 75409 3567816 ~ 3569810 (-)
G60721 NA non-coding downstream 80282 3563532 ~ 3564937 (-)
G60720 NA non-coding downstream 82146 3562592 ~ 3563073 (-)
G60719 NA non-coding downstream 83801 3561009 ~ 3561418 (-)
G60830 NA non-coding upstream 278 3704732 ~ 3706306 (-)
G60839 NA non-coding upstream 28881 3733335 ~ 3734195 (-)
G60850 NA non-coding upstream 57999 3762453 ~ 3765083 (-)
G60858 NA non-coding upstream 127032 3831486 ~ 3852802 (-)
G60932 NA non-coding upstream 265990 3970444 ~ 3996691 (-)
G60679 adra1aa,LOC107553034,LOC107699645,LOC107713032,LOC107671010,LOC107552152 other downstream 610127 3032467 ~ 3035092 (-)
rad9b LOC105891618,LOC107713043,LOC107671006,LOC107552191,LOC107714555 other downstream 821393 2782620 ~ 2823826 (-)
bicdl1 bicdl1,LOC107553048 other downstream 1093032 2521214 ~ 2552187 (-)
G60564 pxnb other downstream 1180848 2460931 ~ 2464371 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other downstream 1483216 2131369 ~ 2162003 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other upstream 140999 3845453 ~ 3850590 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other upstream 295877 4000331 ~ 4006806 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other upstream 384270 4088724 ~ 4092157 (-)
G61023 NA other upstream 596538 4300992 ~ 4307499 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other upstream 688759 4393213 ~ 4397074 (-)

Expression


Co-expression Network