G60850


Basic Information

Item Value
gene id G60850
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3762453 ~ 3765083 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU90035
tggacatttttatttagtttgaaagaTGCAATATGCATCTAGAATGGTCACAAAACTACTTTGGTTTTACAAgattttttgttcgtttttgttTAATCAAGTTACCTTACAGTACAgcaaaaaatgtgaatgaaaaatTGTATCTTGAATTTCGTCTTTTTATCGTAATACAGTACTTTCCAGCTGAACTTAGAATAAAAAATGGACGAAGCCGGTTGTTTACAAATATTGCACACTGCAAGTTGCATTTAGGCTGACGACTAATCAacgtttaaatataaatttctgaatacattcagaaaaaaaatataggcAAATGACCAATCACATCAGGTACAGTATAAAATGGTTAAATACAAAAAGGCAAATTTtagataaatgaaaatactACAAATGAGCAAACACTTGCTTAGTGAACGGTTAGCTCAAAATTGTCTGGAGTGGGTCCGGCTAAATCTAGAAGGGTTTGGGGTCATAGGTCAGTTCGGATGAGCTGATGTGTACAAAGACGCTGGGGTCAGAGGGGATGGTTTTTATGGAGGATGGGTGTTCAAAGATAAAGGACACAGGTATTAGGAGGGGCAGTTCTTTGCTGTTGGTGATTAGCTTGAATATTTGGAGGTTTTAAGGCTAAAAAGACAATTGCACAATCTCATTCTTAGGCCAGAGAGGGGAATGGCAGTGTCTCTGTGCAAGGACATAAAGCCCAGGTTTCTGAAAGCTGATGATCTGATGATTGTGAGCGAGTTTGGCTGTGCTGAATCATGTGACGTACGGCGTCTGAAATGCCTGGGAATCGAAAAGAAACAATTGTGCAGGTCAATGATTTAAAGCGGATTAGCGGCATTGATCATGCGACTCTTTGTACGGACGGTCCGTCGAAGCACAAAGTTGCTCATCGGGCTTTGTTCATGTCGGCTGATTCTTATGCTGATGGTGTAACTCGTAATGAAACGAtccaaaaaatgaatatatagtATGTACAGCAGCCTTTCGGAAGGATATACGATACCAAACGAATTCAAATATGGTTGCTGAATTTATtttcttggaaaaaaatatatacaagcatTGTCAGACCTCGCTGTACATGAACAGCTAATAAAGTGCTGCCAAACGGCCCTGTGTGGTGTTTGATAATCATCAGCTCTCGGATCATCTTACAGTAAGTGACGCTTATAATAGTGCATCAAATGATACTTCTATTAGTGAACACAGCTGCCTACAGTGTTAGAGGAACTCGATGTGTGCGATGGCAGTGATCACTATGGTTCAAGGAGAGACGACAAGACGGAGCGTCAAGGTTTGCTTATGTCTTACGTGTTTGTGCATGTCGTGCACGGCGTCCGCTCAAAGCGGAGGTACATTCATTTTTCTTCAAgacaaagaacatttaaaaacctCATCGAAACGAGAGTTACTGCCACAACCACTGACGGACGTCATAATGTAGCTTATGTCACATTTAGTTCGTTGCTGTTTTACAGTAtgtctttttctaaaaatgaagcTAAAACTCGCTCTCTCTGCTGATGAATTGAGTACTAACCAGGTGCGACACAATAAAAGTCCTCACAGGAAGTAAAATGCCATGCAAAGCGATACAATTTGAATCGGATCAATGATTTATGTATGTAAATCTATGCGGAGCAGGAGTTTGGACCGGTCAGATCCATTTTGAGCTAAGTGGTATTCAAGAGCATTATAAAAATTCGAATTATTGATGATATTataaacctatttaaaaaatttgttttagaaTTAGTGTGAACAGCattcacaatataaaacataaatatatatatatatatatatggtatctATAGAACATGAATTAAAATCTGATAAGAAAGTAGAAATTTCctgattttaagtatttttaaataaatttattattgCAGGGAAGTAGAAAATTCAGAATTCACTTAGGAATaatattccaaataaaatgtaatttcattcaaattcaattcaaaagaacatttaagattattcaaataaaataagtgagTGACAGGACCAAAATAGAAAGCGAAATGTCTCATTGTGGCTGTTCAGGATCAAAAATCTGATTGCTATGAAAGAAATCGTAATGCAGTGGGCAGTAAATCATGTGTCGTTCCTGGTTAGGACGTGGTTTAATGTGAAACAGTGCACTACAGATTAAACAAACCGCCCCAGACGGTTAAAGCTCACATCAGGTTATTACAATATCAGCATTAATGCTAATACCATTGATTACAATCAGAATACAAACCCTACATGGCAAAAAAGATATATCGATATAAGATCATTTCATAAAAACGCACTAGTGCAGAGCGAGAGAGGAATGGTGGGGAAGGGAGCGGGACAACAGGGAAAACGGGATCTCCCATAGGAGAGGACAGGAGCGGGAGAATATGGGAATCTCTCTTAGAGAGCCTCACATAGTAGTTTCTACGATGGTGTGGCTGTGTTTGGTGAAGACGTGGATGCCGTTGGGGTCCAGCGGGTGAAGCAGCTCGCTGTTCTTCAGACTGTACTCCTTAGGACGAGAGCTCGCGCCTCCTTTAACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90035 True 2556 lncRNA 0.38 2 3762453 3765083

Neighbor

gene id symbol gene type direction distance location
si:dkey-222n6.2 LOC107751587,LOC107696908,LOC107552203 coding downstream 37196 3720634 ~ 3725257 (-)
si:ch73-233m11.2 LOC107674326,LOC107714544,LOC107580288 coding downstream 43030 3711617 ~ 3719423 (-)
wdr13 wdr13,LOC107584863,LOC107552201 coding downstream 85825 3669693 ~ 3676628 (-)
asb6 asb6,LOC107696906,LOC107674328,LOC107584902 coding downstream 93115 3665914 ~ 3669338 (-)
si:ch211-255g12.8 NA coding downstream 97264 3658184 ~ 3665189 (-)
grip2a grip2a,LOC107751584,LOC107696921,LOC107714565,LOC107584908,LOC107552207 coding upstream 1471 3766554 ~ 3800174 (-)
hdac6 hdac6,LOC107743106,LOC107701824,LOC107584872,LOC107552211,LOC107727426,LOC107674364 coding upstream 86411 3851494 ~ 3864352 (-)
gata1b LOC107552162,LOC107743132,LOC107701810 coding upstream 102397 3867480 ~ 3873578 (-)
cdk20 cdk20,LOC107727427 coding upstream 110638 3875721 ~ 3879595 (-)
hcfc1b hcfc1b,LOC107674315,LOC107701823,LOC107552212,LOC107727414 coding upstream 115204 3880287 ~ 3898517 (-)
G60839 NA non-coding downstream 28258 3733335 ~ 3734195 (-)
G60830 NA non-coding downstream 56147 3704732 ~ 3706306 (-)
G60819 NA non-coding downstream 57999 3645219 ~ 3704454 (-)
G60822 NA non-coding downstream 80687 3677250 ~ 3681766 (-)
G60729 NA non-coding downstream 182492 3579561 ~ 3579961 (-)
G60858 NA non-coding upstream 66403 3831486 ~ 3852802 (-)
G60932 NA non-coding upstream 205361 3970444 ~ 3996691 (-)
LOC122351087 NA non-coding upstream 233754 3998837 ~ 3999610 (-)
G60937 LOC107701816,LOC107552163,LOC107743107,LOC107584915,LOC107727404 non-coding upstream 255800 4020883 ~ 4024734 (-)
G60963 LOC107727423,LOC107674368,LOC107743130,LOC107552222 non-coding upstream 297822 4062905 ~ 4063653 (-)
G60679 adra1aa,LOC107553034,LOC107699645,LOC107713032,LOC107671010,LOC107552152 other downstream 727361 3032467 ~ 3035092 (-)
rad9b LOC105891618,LOC107713043,LOC107671006,LOC107552191,LOC107714555 other downstream 938627 2782620 ~ 2823826 (-)
bicdl1 bicdl1,LOC107553048 other downstream 1210266 2521214 ~ 2552187 (-)
G60564 pxnb other downstream 1298082 2460931 ~ 2464371 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other downstream 1600450 2131369 ~ 2162003 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other upstream 80370 3845453 ~ 3850590 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other upstream 235248 4000331 ~ 4006806 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other upstream 323641 4088724 ~ 4092157 (-)
G61023 NA other upstream 535909 4300992 ~ 4307499 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other upstream 628130 4393213 ~ 4397074 (-)

Expression


Co-expression Network