G60858


Basic Information

Item Value
gene id G60858
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3831486 ~ 3852802 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU90051
aaaaaaaaaacctaacaggcaCAGTACACTTAACAgtaaaaaactaacaaacatttCAGTGCATTTACGGAGGACTAATTCTTAAAACCTGCAAAGCAGCCTAAGCTTGCTGAGCACAGAGGCTATAAAGTGGACCAATTCTaactgcaaggacagtctggcgcttctgactcacaatcTTTGCGTaagttacattttcatattaaaaggACCTGCTTCTTACTATTCAAATGTGAGTTTTGAGCAGAGTACATCAGtgattattgtttgttttgcacagaaataataaaatacaatatgtgtaaatgtatgtgttttttaagcttaaactgcctaaacacattgcattacaccaaaaactcaaaatagtgttctttttagcaacatcacatgaccgcttaaaaaaaaaaaaaagtacagtaatatAACATTGTAAATACTGACTTGTTG

Function

NR:

description
PREDICTED: syntaxin-binding protein 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90051 True 450 lncRNA 0.33 2 3831486 3852802

Neighbor

gene id symbol gene type direction distance location
grip2a grip2a,LOC107751584,LOC107696921,LOC107714565,LOC107584908,LOC107552207 coding downstream 31312 3766554 ~ 3800174 (-)
si:dkey-222n6.2 LOC107751587,LOC107696908,LOC107552203 coding downstream 106229 3720634 ~ 3725257 (-)
si:ch73-233m11.2 LOC107674326,LOC107714544,LOC107580288 coding downstream 112063 3711617 ~ 3719423 (-)
wdr13 wdr13,LOC107584863,LOC107552201 coding downstream 154858 3669693 ~ 3676628 (-)
asb6 asb6,LOC107696906,LOC107674328,LOC107584902 coding downstream 162148 3665914 ~ 3669338 (-)
gata1b LOC107552162,LOC107743132,LOC107701810 coding upstream 14678 3867480 ~ 3873578 (-)
cdk20 cdk20,LOC107727427 coding upstream 22919 3875721 ~ 3879595 (-)
hcfc1b hcfc1b,LOC107674315,LOC107701823,LOC107552212,LOC107727414 coding upstream 27485 3880287 ~ 3898517 (-)
irak1 irak1,LOC107701821,LOC107674316 coding upstream 46565 3899367 ~ 3908886 (-)
mecp2 LOC107701822,LOC107743113,LOC107552216,LOC107584876 coding upstream 56631 3909433 ~ 3921951 (-)
G60850 NA non-coding downstream 66403 3762453 ~ 3765083 (-)
G60839 NA non-coding downstream 97291 3733335 ~ 3734195 (-)
G60830 NA non-coding downstream 125180 3704732 ~ 3706306 (-)
G60819 NA non-coding downstream 127032 3645219 ~ 3704454 (-)
G60822 NA non-coding downstream 149720 3677250 ~ 3681766 (-)
G60932 NA non-coding upstream 117642 3970444 ~ 3996691 (-)
LOC122351087 NA non-coding upstream 146035 3998837 ~ 3999610 (-)
G60937 LOC107701816,LOC107552163,LOC107743107,LOC107584915,LOC107727404 non-coding upstream 168081 4020883 ~ 4024734 (-)
G60963 LOC107727423,LOC107674368,LOC107743130,LOC107552222 non-coding upstream 210103 4062905 ~ 4063653 (-)
LOC122350738 NA non-coding upstream 366777 4219579 ~ 4222285 (-)
G60679 adra1aa,LOC107553034,LOC107699645,LOC107713032,LOC107671010,LOC107552152 other downstream 796394 3032467 ~ 3035092 (-)
rad9b LOC105891618,LOC107713043,LOC107671006,LOC107552191,LOC107714555 other downstream 1007660 2782620 ~ 2823826 (-)
bicdl1 bicdl1,LOC107553048 other downstream 1279299 2521214 ~ 2552187 (-)
G60564 pxnb other downstream 1367115 2460931 ~ 2464371 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other downstream 1669483 2131369 ~ 2162003 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other upstream 147529 4000331 ~ 4006806 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other upstream 235922 4088724 ~ 4092157 (-)
G61023 NA other upstream 448190 4300992 ~ 4307499 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other upstream 540411 4393213 ~ 4397074 (-)
LOC122350811 NA other upstream 1334452 5187254 ~ 5187921 (-)

Expression


Co-expression Network