G61196


Basic Information

Item Value
gene id G61196
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 4908840 ~ 4909470 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU90582
cgggcaactcccctctcgcaccgggacagagaaaccgggaattagtcggaatgctcaaccagccaccgggtaaatgaccaTAAGCAAGCgccacttacccttcctggtggctgggagcgagtctccgttgttcctccatcccggcatgggtaccagcgagaggggatgacgtcatcagatgtcgcccaactgtgccgtctaagctccgccttgcccgcattctccaccactgtgacgggaggagccaacgacagacacagtgggcgtggcgtcaggcctcggagaggcttttttttattattaacaaaataataataatacaaaataaagtgtccagggaaaagtgtccaaataaaagggggatctggtgtcctcgcgTGCGTGCCgcgggaaagtgaaggttgaggccgtgttccaggggggaagggtccaggtaaggggcggagtccggcggtcgcacacgctcccctttttctggtccggggcgcgaggggcggcggcttcttccgcggcgtctccgtcgccgttgctcgggcggcagagtgggatgagctctgtgttcacggacggcgggtgaggtccatcgcgcacccttcctggacccacg

Function

GO: NA

KEGG:

id description
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU90582 True 607 lncRNA 0.60 2 4908840 4909470

Neighbor

gene id symbol gene type direction distance location
si:dkey-8e10.3 si:dkey-8e10.3,LOC107743123,LOC107601742,LOC107674312,LOC107734510,LOC107653415,LOC107584926 coding downstream 48539 4853786 ~ 4860301 (-)
ptpn18 LOC107743092,LOC107653414,LOC107601761,LOC107734536,LOC107674370,LOC107584895 coding downstream 219360 4674326 ~ 4689480 (-)
plxna3 plxna3,LOC107734520,LOC107653403,LOC107743094,LOC107674285,LOC106572068 coding downstream 253371 4510069 ~ 4655469 (-)
slc6a8 slc6a8,LOC107734513,LOC103036862,LOC107653404,LOC108441094 coding downstream 442783 4432982 ~ 4466057 (-)
zgc:86609 zgc:86609,LOC107653429,LOC107743102,LOC107601757,LOC107734524,LOC107674347,LOC108265646 coding downstream 593104 4311724 ~ 4315736 (-)
slc66a1 pqlc2,LOC107734535,LOC107674372,LOC107725314,LOC107664981 coding upstream 444149 5353619 ~ 5361985 (-)
trim33 trim33,LOC107725313,LOC107734526,LOC107664979,LOC107570974 coding upstream 453256 5362726 ~ 5384419 (-)
bcas2 bcas2,LOC107664982,LOC107725297,LOC107734517,LOC107674303 coding upstream 476237 5385707 ~ 5390120 (-)
dennd2c dennd2c,LOC107665005,LOC107598967,LOC107734514,LOC107674357,LOC107725285,LOC107566809 coding upstream 481355 5390825 ~ 5410171 (-)
ampd1 ampd1,LOC107664993 coding upstream 501481 5410951 ~ 5423401 (-)
G61188 NA non-coding downstream 23409 4876960 ~ 4885431 (-)
G61186 NA non-coding downstream 41654 4866981 ~ 4867186 (-)
G61183 NA non-coding downstream 55384 4852279 ~ 4853456 (-)
G61170 kcnd1,LOC106532789,LOC103362488 non-coding downstream 81901 4824014 ~ 4826939 (-)
G61135 NA non-coding downstream 168639 4738154 ~ 4740201 (-)
G61209 NA non-coding upstream 24099 4933569 ~ 4933797 (-)
LOC122349981 NA non-coding upstream 40163 4949633 ~ 4955156 (-)
G61212 NA non-coding upstream 43585 4953055 ~ 4953446 (-)
G61216 NA non-coding upstream 52113 4961583 ~ 5005566 (-)
G61215 pim1,LOC107584899,LOC107598956,LOC107734527,LOC107674355,LOC107653400,LOC107725309,LOC107391354 non-coding upstream 92097 5001567 ~ 5002883 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other downstream 511766 4393213 ~ 4397074 (-)
G61023 NA other downstream 601341 4300992 ~ 4307499 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other downstream 816683 4088724 ~ 4092157 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other downstream 902034 4000331 ~ 4006806 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other downstream 1058250 3845453 ~ 3850590 (-)
LOC122350811 NA other upstream 277784 5187254 ~ 5187921 (-)
LOC122349940 fnbp1,fnbp1a,LOC107720911,LOC107675683,LOC107661630,LOC107757295,LOC107674371 other upstream 286282 5195752 ~ 5207522 (-)
nr1h5 nr1h5,LOC107653410,LOC107598964,LOC107725330,LOC107674374,LOC107734534,LOC107570978 other upstream 431924 5341394 ~ 5351279 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other upstream 566743 5476213 ~ 5510943 (-)
c8h9orf116 LOC107757294 other upstream 695702 5605172 ~ 5609572 (-)

Expression


Co-expression Network