G61215 (pim1,LOC107584899,LOC107598956,LOC107734527,LOC107674355,LOC107653400,LOC107725309,LOC107391354)


Basic Information

Item Value
gene id G61215
gene name pim1,LOC107584899,LOC107598956,LOC107734527,LOC107674355,LOC107653400,LOC107725309,LOC107391354
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 5001567 ~ 5002883 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU90603
TACCGTCGAAATCGGTGTAAACGGTGTCTTTGAGCAATGCCCCCGATCCAAAGTCGATGAGCTTCAGATCGCCGGTCCGAAGATCGATGAGAATGTTCTCGTCCTTGATGTCGCGGTGAACGACGCCGTTGTTGTGGCAGTGACGCACCGCTTCCAGGACCTGGCGGAAAAAGTTCCTGGCGAGCTCCTCCGGTAACGCGCCCTTCTCCGTGATGAAATCAAACAAGTCCTTGACGGTCTCCGGTCTTTCCATGACGATAATGAAGCTGTCCGGTCGCTCGTACCAGTCCAGCATCTTGATCACGCCACGGAATCCGGTGCCGACCTTCTTTAATAGGACGATCTCCATAGGGACGCGCGCGCCATTGGGCTGGAAACGGAGGACATGTTCGTTTTAGCGACGCTGTCATTTGTTATTTACGCGCGATATTTTGGATACAAATCATAGGAATATAATCACTCTAATTAAATACTCACCAGCTCTCCCCATTCGGTCACACGATCTTTTGCGAcatgcttgatggcaacctagaaatagcaaataaatgtgTGGTTAAGCCGTGAACCGACAGTGTATATTTggattgcataaaaaaaaaacccaacacacacacacgttatggACGTCCTAAACGTTCAGacttatgtaaacaaaaacactccGTTCTGGAACCTACCGGCGCGCCATCGGCGATCCTCAAACCCGCATAGACCGTCCCAAAACCGCCGCTTCCCAGCACGGAGCCGACCTGATACATCTTCTCGAACGGCTCTTTCTCCTTAACTGTTGTAGCTGGATCTTCGCCGGCATGTCCACGGTGGAAATGTGAGCGAATGTGTTGAATTTCGATAGAAGCATTTTATAATCCGAAACGCGAGTTCTCTTCGGGGGTTATTCCAATGTTGCGGCCGAAATCCGTCGTGTGATGTTAGAGATGGATGTAGGGAAGGTCTGCTCGAGGGATCCGGTCTAGAAGCCTGCAGAAATCCCTTCTCATCGATGCTCGATGGGTTTGGATTTTCAAGACGAACTTTAAACGACCGCGGGGGTCTATTCCAGtttagaaaatgaaattaaataaacaaacgatTAATAGAGTTCGAAGATAAATATTATTGTCTGAGGTGCTCGACGGACACAAACACCCGGC

Function

symbol description
pim1 Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within camera-type eye morphogenesis and optokinetic behavior. Predicted to be active in cytoplasm. Is expressed in brain and eye. Orthologous to human PIM1 (Pim-1 proto-oncogene, serine/threonine kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase pim-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90603 True 1151 lncRNA 0.49 2 5001567 5002883

Neighbor

gene id symbol gene type direction distance location
si:dkey-8e10.3 si:dkey-8e10.3,LOC107743123,LOC107601742,LOC107674312,LOC107734510,LOC107653415,LOC107584926 coding downstream 141266 4853786 ~ 4860301 (-)
ptpn18 LOC107743092,LOC107653414,LOC107601761,LOC107734536,LOC107674370,LOC107584895 coding downstream 312087 4674326 ~ 4689480 (-)
plxna3 plxna3,LOC107734520,LOC107653403,LOC107743094,LOC107674285,LOC106572068 coding downstream 346098 4510069 ~ 4655469 (-)
slc6a8 slc6a8,LOC107734513,LOC103036862,LOC107653404,LOC108441094 coding downstream 535510 4432982 ~ 4466057 (-)
zgc:86609 zgc:86609,LOC107653429,LOC107743102,LOC107601757,LOC107734524,LOC107674347,LOC108265646 coding downstream 685831 4311724 ~ 4315736 (-)
slc66a1 pqlc2,LOC107734535,LOC107674372,LOC107725314,LOC107664981 coding upstream 350736 5353619 ~ 5361985 (-)
trim33 trim33,LOC107725313,LOC107734526,LOC107664979,LOC107570974 coding upstream 359843 5362726 ~ 5384419 (-)
bcas2 bcas2,LOC107664982,LOC107725297,LOC107734517,LOC107674303 coding upstream 382824 5385707 ~ 5390120 (-)
dennd2c dennd2c,LOC107665005,LOC107598967,LOC107734514,LOC107674357,LOC107725285,LOC107566809 coding upstream 387942 5390825 ~ 5410171 (-)
ampd1 ampd1,LOC107664993 coding upstream 408068 5410951 ~ 5423401 (-)
LOC122349981 NA non-coding downstream 46411 4949633 ~ 4955156 (-)
G61212 NA non-coding downstream 48121 4953055 ~ 4953446 (-)
G61209 NA non-coding downstream 67770 4933569 ~ 4933797 (-)
G61196 NA non-coding downstream 92097 4908840 ~ 4909470 (-)
G61188 NA non-coding downstream 116136 4876960 ~ 4885431 (-)
G61459 NA non-coding upstream 140316 5143199 ~ 5266038 (-)
G61476 NA non-coding upstream 320229 5323112 ~ 5366348 (-)
G61478 NA non-coding upstream 334104 5336987 ~ 5352457 (-)
G61502 NA non-coding upstream 567521 5570404 ~ 5573893 (-)
G61507 NA non-coding upstream 580032 5582915 ~ 5584720 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other downstream 604493 4393213 ~ 4397074 (-)
G61023 NA other downstream 694068 4300992 ~ 4307499 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other downstream 909410 4088724 ~ 4092157 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other downstream 994761 4000331 ~ 4006806 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other downstream 1150977 3845453 ~ 3850590 (-)
LOC122350811 NA other upstream 184371 5187254 ~ 5187921 (-)
LOC122349940 fnbp1,fnbp1a,LOC107720911,LOC107675683,LOC107661630,LOC107757295,LOC107674371 other upstream 192869 5195752 ~ 5207522 (-)
nr1h5 nr1h5,LOC107653410,LOC107598964,LOC107725330,LOC107674374,LOC107734534,LOC107570978 other upstream 338511 5341394 ~ 5351279 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other upstream 473330 5476213 ~ 5510943 (-)
c8h9orf116 LOC107757294 other upstream 602289 5605172 ~ 5609572 (-)

Expression


Co-expression Network