G29955


Basic Information

Item Value
gene id G29955
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8872133 ~ 8873812 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU33918
GGTTTATAACATTTATTTTATACTGTACAGATGTAATTGGCAATAATGTAGACATGGTTATTTGCACGGTGCTGAAGGCTAGTTCATTTATGCCAAAACTCCGCTGTGTAAAATTTGTAAACATAGTCAGGTCACTCCTCCCAAGGGCTCATGTCTGTGTCGATGGCCACACAGTTATATGCAGCATAGCGAAGCTTCTCTTCACAAACTTTAGCACTTGGGTATTTGGGTAGATAAAGGGTGCTGGAACATGTGGAAGATTGAGGAAGTGCATCTGTGGTTTCAGACCCTTGTTTATCTGGAAAGATGTAAATTGGAGCAGGAAGACGACTTCTGCCAGTCACAAACCTCAAAAACCTACTACGATCCTCATTGGTGAAGTTCATCAGGGCTTCCCATAAGTACTGCACTCTGACATCTGTTTGTTCCAAGTCTTCATAGCGTGTGAGGCGTTTAAGGGCCTCCACTGTGATCTCTGGGTCTCCACACACTTTCTTCTCCACTTCCTGCCATGTCAGGAGATCAAGCACAGCTTGCGGCACCACTTTCACCAGTCCTGCCTGCATGGCAGCTATCTGTTCTCGGCTCTCTTCTAGTCTCGATTTCTGTACCAGGCGTATGAACTCCATGCGATCTTCATATCGGACCACCACTCCACTTCCTCCTGGAATCAGCTCCACCAGCCGCCCGTCACTCAGGGGTGTGGTGTACACAAGCTCCTGGCCGAACTTAAAGTCAAACGTGTCCTTGTCCATATGCTCCATAGCCTCCAATAACTTCACCAGCACTGAATCTACTGCAGGAAAATCTTTCGTCCAGCTGACCGTTTC

Function

NR:

description
PREDICTED: 60S ribosomal protein L13-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33918 True 830 lncRNA 0.47 7 8872133 8873812

Neighbor

gene id symbol gene type direction distance location
CI01000004_08861514_08864815 MGC81873, ACADM coding downstream 7318 8861240 ~ 8864815 (-)
CI01000004_08857253_08860111 RABGGTB coding downstream 12022 8857253 ~ 8860111 (-)
CI01000004_08847888_08849951 NA coding downstream 22105 8846758 ~ 8850028 (-)
CI01000004_08714010_08716995 NA coding downstream 155074 8713882 ~ 8717059 (-)
CI01000004_08592797_08594424 CLDN11A coding downstream 277514 8592314 ~ 8594619 (-)
CI01000004_08878465_08881325 BEST4 coding upstream 4653 8878465 ~ 8881485 (-)
CI01000004_08887155_08890419 NA coding upstream 11947 8885759 ~ 8890419 (-)
CI01000004_08896031_08915598 NA coding upstream 21763 8895575 ~ 8915662 (-)
CI01000004_08931605_08938354 NDC1 coding upstream 57162 8930974 ~ 8938354 (-)
CI01000004_08939621_08940367 NA coding upstream 65517 8939329 ~ 8940413 (-)
G29989 NA non-coding downstream 49656 8822269 ~ 8822477 (-)
G29986 NA non-coding downstream 56596 8813396 ~ 8815537 (-)
G29948 NA non-coding downstream 127727 8741906 ~ 8744406 (-)
G29929 NA non-coding downstream 196706 8675225 ~ 8675427 (-)
G29928 NA non-coding downstream 197068 8674825 ~ 8675065 (-)
G29943 NA non-coding upstream 885 8874697 ~ 8877199 (-)
G30009 NA non-coding upstream 105212 8979024 ~ 8980984 (-)
G30012 NA non-coding upstream 170613 9044425 ~ 9044678 (-)
G30013 NA non-coding upstream 176144 9049956 ~ 9050446 (-)
G30024 NA non-coding upstream 222909 9096721 ~ 9096984 (-)
G29746 NA other downstream 514006 8354498 ~ 8358127 (-)
G29656 NA other downstream 906633 7964364 ~ 7965500 (-)
G29388 NA other downstream 2240226 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 2326561 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 3244619 5616644 ~ 5628289 (-)
G30316 NA other upstream 504125 9377937 ~ 9406921 (-)
G31203 NA other upstream 1872625 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 2533653 11406957 ~ 11412907 (-)
G32150 NA other upstream 2902707 11776519 ~ 11780951 (-)
G32207 NA other upstream 3502356 12376168 ~ 12384780 (-)

Expression


Co-expression Network